RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 LARGE2Q8N3Y3 721 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 EYA3Q99504 573 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 ANKRD2Q9GZV1 360 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 POLLQ9UGP5 575 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 GGA1Q9UJY5 639 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 CHMP3Q9Y3E7 222 aa20.4■□□□□ 0.86
COL2A1-206ENST00000483376 COL4A5P29400 1685 aa20.39■□□□□ 0.86
COL2A1-206ENST00000483376 MTX1Q13505 466 aa20.39■□□□□ 0.85
COL2A1-206ENST00000483376 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
COL2A1-206ENST00000483376 RLBP1P12271 317 aa20.38■□□□□ 0.85
COL2A1-206ENST00000483376 AOC3Q16853 763 aa20.38■□□□□ 0.85
COL2A1-206ENST00000483376 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
COL2A1-206ENST00000483376 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
COL2A1-206ENST00000483376 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
COL2A1-206ENST00000483376 LEMD3Q9Y2U8 911 aa20.38■□□□□ 0.85
COL2A1-206ENST00000483376 WASHC4Q2M389 1173 aa20.37■□□□□ 0.85
COL2A1-206ENST00000483376 LDHAL6AQ6ZMR3 332 aa20.37■□□□□ 0.85
COL2A1-206ENST00000483376 NIM1KQ8IY84 436 aa20.37■□□□□ 0.85
COL2A1-206ENST00000483376 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.37■□□□□ 0.85
COL2A1-206ENST00000483376 FBXO3Q9UK99 471 aa20.37■□□□□ 0.85
COL2A1-206ENST00000483376 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
COL2A1-206ENST00000483376 MED23Q9ULK4 1368 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 C6orf229H3BNL8 230 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 UFL1O94874 794 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 GNAI2P04899 355 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 RFX5P48382 616 aaPredicted RBP20.36■□□□□ 0.85
COL2A1-206ENST00000483376 CHRNDQ07001 517 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 TAF7LQ5H9L4 462 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 ZNRF3Q9ULT6 936 aa20.36■□□□□ 0.85
COL2A1-206ENST00000483376 ZBTB7BO15156 539 aaPredicted RBP20.35■□□□□ 0.85
COL2A1-206ENST00000483376 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
COL2A1-206ENST00000483376 RIPOR2Q9Y4F9 1068 aa20.35■□□□□ 0.85
COL2A1-206ENST00000483376 WDR90Q96KV7 1748 aa20.35■□□□□ 0.85
COL2A1-206ENST00000483376 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
COL2A1-206ENST00000483376 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
COL2A1-206ENST00000483376 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
COL2A1-206ENST00000483376 ITPRIPQ8IWB1 547 aa20.34■□□□□ 0.85
COL2A1-206ENST00000483376 GPC2Q8N158 579 aa20.34■□□□□ 0.85
COL2A1-206ENST00000483376 ZNF594Q96JF6 807 aaPredicted RBP20.34■□□□□ 0.85
COL2A1-206ENST00000483376 ZC3H12CQ9C0D7 883 aaKnown RBP20.34■□□□□ 0.85
COL2A1-206ENST00000483376 CNNM1Q9NRU3 951 aa20.34■□□□□ 0.85
COL2A1-206ENST00000483376 MROH5Q6ZUA9 1318 aa20.33■□□□□ 0.85
COL2A1-206ENST00000483376 EIF6P56537 245 aaKnown RBP20.33■□□□□ 0.85
COL2A1-206ENST00000483376 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
COL2A1-206ENST00000483376 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
COL2A1-206ENST00000483376 MVPQ14764 893 aaKnown RBP20.32■□□□□ 0.84
COL2A1-206ENST00000483376 COPRSQ9NQ92 184 aa20.32■□□□□ 0.84
COL2A1-206ENST00000483376 A0A1B0GUL6 1792 aa20.31■□□□□ 0.84
COL2A1-206ENST00000483376 IRS2Q9Y4H2 1338 aa20.31■□□□□ 0.84
COL2A1-206ENST00000483376 CIAO1O76071 339 aa20.31■□□□□ 0.84
COL2A1-206ENST00000483376 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
COL2A1-206ENST00000483376 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
COL2A1-206ENST00000483376 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
COL2A1-206ENST00000483376 EYA2O00167 538 aa20.3■□□□□ 0.84
COL2A1-206ENST00000483376 KIF3CO14782 793 aa20.3■□□□□ 0.84
COL2A1-206ENST00000483376 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
COL2A1-206ENST00000483376 PODNQ7Z5L7 613 aa20.3■□□□□ 0.84
COL2A1-206ENST00000483376 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
COL2A1-206ENST00000483376 PUS3Q9BZE2 481 aaKnown RBP20.3■□□□□ 0.84
COL2A1-206ENST00000483376 ZNF609O15014 1411 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 YDJCA8MPS7 323 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
COL2A1-206ENST00000483376 CXCL9Q07325 125 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 UBE4AQ14139 1066 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 VGLL2Q8N8G2 317 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 NMRK2Q9NPI5 230 aa20.29■□□□□ 0.84
COL2A1-206ENST00000483376 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 POTECB2RU33 542 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 PLIN1O60240 522 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 ECE2O60344 883 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 TNIP1Q15025 636 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 CIAPIN1Q6FI81 312 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 GPR101Q96P66 508 aaPredicted RBP20.28■□□□□ 0.84
COL2A1-206ENST00000483376 COA1Q9GZY4 146 aa20.28■□□□□ 0.84
COL2A1-206ENST00000483376 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 PDE8BO95263 885 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 KCNJ4P48050 445 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 KLHDC4Q8TBB5 520 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 DBNDD1Q9H9R9 158 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 SCN4AP35499 1836 aa20.27■□□□□ 0.84
COL2A1-206ENST00000483376 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
COL2A1-206ENST00000483376 TAF5LO75529 589 aa20.26■□□□□ 0.83
COL2A1-206ENST00000483376 POLA2Q14181 598 aa20.26■□□□□ 0.83
COL2A1-206ENST00000483376 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
COL2A1-206ENST00000483376 ZBTB40Q9NUA8 1239 aa20.26■□□□□ 0.83
COL2A1-206ENST00000483376 IL15P40933 162 aaPredicted RBP20.25■□□□□ 0.83
COL2A1-206ENST00000483376 ATP8B2P98198 1209 aa20.25■□□□□ 0.83
COL2A1-206ENST00000483376 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
COL2A1-206ENST00000483376 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
COL2A1-206ENST00000483376 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
COL2A1-206ENST00000483376 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
COL2A1-206ENST00000483376 COG6Q9Y2V7 657 aa20.25■□□□□ 0.83
COL2A1-206ENST00000483376 FGFR2P21802 821 aa20.24■□□□□ 0.83
COL2A1-206ENST00000483376 RPS12P25398 132 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms