RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-205	ENST00000483122	MNS1	Q8NEH6	495 aa		13.79	□□□□□ -0.2
VTI1A-205	ENST00000483122	ANO10	Q9NW15	660 aa		13.79	□□□□□ -0.2
VTI1A-205	ENST00000483122	IMPACT	Q9P2X3	320 aa		13.79	□□□□□ -0.2
VTI1A-205	ENST00000483122	FAM208A	Q9UK61	1670 aa	Known RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	CTAGE5	O15320	804 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	GLRX3	O76003	335 aa	Known RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	ETF1	P62495	437 aa	Known RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	GPS2	Q13227	327 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	BLOC1S2	Q6QNY1	142 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	FAM227B	Q96M60	508 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	XPO4	Q9C0E2	1151 aa	Known RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	MAP3K5	Q99683	1374 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	SMC2	O95347	1197 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	MTHFSD	Q2M296	383 aa	Known RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	CCDC30	Q5VVM6	783 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	CCDC150	Q8NCX0	1101 aa		13.78	□□□□□ -0.2
VTI1A-205	ENST00000483122	LTBP4	Q8N2S1	1624 aa		13.77	□□□□□ -0.2
VTI1A-205	ENST00000483122	USP42	Q9H9J4	1324 aa	Known RBP	13.77	□□□□□ -0.2
VTI1A-205	ENST00000483122	URI1	O94763	535 aa	Predicted RBP	13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	SFPQ	P23246	707 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	RPS6KB1	P23443	525 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	PSMA5	P28066	241 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	EVC	P57679	992 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	TRIM65	Q6PJ69	517 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	SRL	Q86TD4	932 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	CEP57L1	Q8IYX8	460 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	FBXO18	Q8NFZ0	1043 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	IFNK	Q9P0W0	207 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	PHLPP2	Q6ZVD8	1323 aa		13.77	□□□□□ -0.21
VTI1A-205	ENST00000483122	ATP8B1	O43520	1251 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	ADD1	P35611	737 aa	Known RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	FOSB	P53539	338 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	CCDC158	Q5M9N0	1113 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	MAP4K1	Q92918	833 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	RRP15	Q9Y3B9	282 aa	Known RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	TTC41P	Q6P2S7	1318 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	NALCN	Q8IZF0	1738 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	XIRP1	Q702N8	1843 aa	Known RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	LMAN1	P49257	510 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	NMI	Q13287	307 aa	Predicted RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	HSP90AB2P	Q58FF8	381 aa		13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	PROSER2	Q86WR7	435 aa	Predicted RBP	13.76	□□□□□ -0.21
VTI1A-205	ENST00000483122	EFCAB8	A8MWE9	144 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122		H3BQV1	296 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	KIN	O60870	393 aa	Known RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	ANKRD1	Q15327	319 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	IFFO2	Q5TF58	517 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	ENGASE	Q8NFI3	743 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	GOLGA5	Q8TBA6	731 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	CWC15	Q9P013	229 aa	Known RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	CFAP45	Q9UL16	551 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	ITSN1	Q15811	1721 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	KCNJ6	P48051	423 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	GTF2A1	P52655	376 aa	Predicted RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	CCDC73	Q6ZRK6	1079 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	PHAX	Q9H814	394 aa	Known RBP	13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	YY1AP1	Q9H869	796 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	ADAM21	Q9UKJ8	722 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	PARP3	Q9Y6F1	533 aa		13.75	□□□□□ -0.21
VTI1A-205	ENST00000483122	OS9	Q13438	667 aa	Predicted RBP	13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	RCOR1	Q9UKL0	485 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	TMEM94	Q12767	1356 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122		H3BQF6	201 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	TUBB4A	P04350	444 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	FSIP1	Q8NA03	581 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	AK7	Q96M32	723 aa		13.74	□□□□□ -0.21
VTI1A-205	ENST00000483122	EXOC4	Q96A65	974 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	SRRT	Q9BXP5	876 aa	Known RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	FUT8	Q9BYC5	575 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	ECHDC1	Q9NTX5	307 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	MAP3K19	Q56UN5	1328 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	WASL	O00401	505 aa	Predicted RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	TPM1	P09493	284 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	FAM160A1	Q05DH4	1040 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	DPCR1	Q3MIW9	517 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	ICE2	Q659A1	982 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	FAM177A1	Q8N128	213 aa	Predicted RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	USP28	Q96RU2	1077 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	NAT10	Q9H0A0	1025 aa	Known RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	PXDNL	A1KZ92	1463 aa		13.73	□□□□□ -0.21
VTI1A-205	ENST00000483122	MYH15	Q9Y2K3	1946 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122		A0A0D9SFI3	127 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	ACTN2	P35609	894 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	TEX2	Q8IWB9	1127 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	EVI5L	Q96CN4	794 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	FMNL2	Q96PY5	1086 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	PSD3	Q9NYI0	1048 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	MON2	Q7Z3U7	1717 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	RGPD1	P0DJD0	1748 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	GOLGA8F	Q08AF8	430 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	GOLGA8DP	Q0D2H9	430 aa		13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	GNL2	Q13823	731 aa	Known RBP	13.72	□□□□□ -0.21
VTI1A-205	ENST00000483122	IQUB	Q8NA54	791 aa		13.72	□□□□□ -0.21

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