RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 DCPSQ96C86 337 aaKnown RBP9.64□□□□□ -0.87
CSDE1-206ENST00000483030 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
CSDE1-206ENST00000483030 GBA2Q9HCG7 927 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-206ENST00000483030 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
CSDE1-206ENST00000483030 FAM155AB1AL88 458 aaPredicted RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 ADM5C9JUS6 153 aa9.63□□□□□ -0.87
CSDE1-206ENST00000483030 ECE2O60344 883 aa9.63□□□□□ -0.87
CSDE1-206ENST00000483030 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 ZNF157P51786 506 aaPredicted RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 RPS8P62241 208 aaKnown RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 KIF23Q02241 960 aaPredicted RBP9.63□□□□□ -0.87
CSDE1-206ENST00000483030 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
CSDE1-206ENST00000483030 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
CSDE1-206ENST00000483030 EYA3Q99504 573 aa9.63□□□□□ -0.87
CSDE1-206ENST00000483030 G3V3G9 751 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 IRS4O14654 1257 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-206ENST00000483030 TRPA1O75762 1119 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 TBC1D16Q8TBP0 767 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 ZC3H12CQ9C0D7 883 aaKnown RBP9.62□□□□□ -0.87
CSDE1-206ENST00000483030 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-206ENST00000483030 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 RTL9Q8NET4 1388 aa9.62□□□□□ -0.87
CSDE1-206ENST00000483030 ASTN2O75129 1339 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-206ENST00000483030 DLG5Q8TDM6 1919 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 VIL1P09327 827 aaKnown RBP9.61□□□□□ -0.87
CSDE1-206ENST00000483030 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
CSDE1-206ENST00000483030 RALBP1Q15311 655 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 DUSP27Q5VZP5 1158 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 TRPM7Q96QT4 1865 aa9.61□□□□□ -0.87
CSDE1-206ENST00000483030 DUOX1Q9NRD9 1551 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 UFL1O94874 794 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 HOXB7P09629 217 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 CSRNP1Q96S65 589 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 SAGE1Q9NXZ1 904 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 ANKIB1Q9P2G1 1089 aa9.6□□□□□ -0.87
CSDE1-206ENST00000483030 SOX10P56693 466 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 SCARF1Q14162 830 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 ANGEL2Q5VTE6 544 aaKnown RBP9.59□□□□□ -0.87
CSDE1-206ENST00000483030 ZBTB38Q8NAP3 1195 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-206ENST00000483030 JARID2Q92833 1246 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-206ENST00000483030 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-206ENST00000483030 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 GGA1Q9UJY5 639 aa9.59□□□□□ -0.87
CSDE1-206ENST00000483030 CASP8AP2Q9UKL3 1982 aa9.58□□□□□ -0.88
CSDE1-206ENST00000483030 ELL2O00472 640 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-206ENST00000483030 SLC10A3P09131 477 aa9.58□□□□□ -0.88
CSDE1-206ENST00000483030 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-206ENST00000483030 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-206ENST00000483030 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
CSDE1-206ENST00000483030 PHAXQ9H814 394 aaKnown RBP9.58□□□□□ -0.88
CSDE1-206ENST00000483030 ADAMTS8Q9UP79 889 aa9.58□□□□□ -0.88
CSDE1-206ENST00000483030 USP17L8P0C7I0 530 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 HSP90B1P14625 803 aaKnown RBP9.57□□□□□ -0.88
CSDE1-206ENST00000483030 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
CSDE1-206ENST00000483030 CCDC152Q4G0S7 254 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 SP7Q8TDD2 431 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-206ENST00000483030 GMLQ99445 158 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 MYD88Q99836 296 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 MBIPQ9NS73 344 aa9.57□□□□□ -0.88
CSDE1-206ENST00000483030 SCAF8Q9UPN6 1271 aaKnown RBP9.57□□□□□ -0.88
CSDE1-206ENST00000483030 TAF1P21675 1872 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 LAMB2P55268 1798 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 ANKRD36CQ5JPF3 1778 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 COL4A1P02462 1669 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 WTIPA6NIX2 430 aaPredicted RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 UBE2Q2LH0YL09 131 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 PDE8AO60658 829 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 PCCAP05165 728 aaPredicted RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 PLCB2Q00722 1185 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 DDX10Q13206 875 aaKnown RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 MOB2Q70IA6 237 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 CTU1Q7Z7A3 348 aaKnown RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 RASAL3Q86YV0 1011 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 MYOZ2Q9NPC6 264 aa9.56□□□□□ -0.88
CSDE1-206ENST00000483030 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
CSDE1-206ENST00000483030 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 ATP2B4P23634 1241 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 FKBP1BP68106 108 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 CWC25Q9NXE8 425 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-206ENST00000483030 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms