RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 LTBP1Q14766 1721 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 UBTFL1P0CB47 393 aaPredicted RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 KAZALD1Q96I82 304 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 RTFDC1Q9BY42 306 aaPredicted RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
SNX4-205ENST00000482965 ANKIB1Q9P2G1 1089 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 HDAC5Q9UQL6 1122 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 DUOX1Q9NRD9 1551 aa11.02□□□□□ -0.65
SNX4-205ENST00000482965 AOC3Q16853 763 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 NIM1KQ8IY84 436 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 EYA3Q99504 573 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 XDHP47989 1333 aa11.01□□□□□ -0.65
SNX4-205ENST00000482965 GLTPD2A6NH11 291 aa11□□□□□ -0.65
SNX4-205ENST00000482965 UFL1O94874 794 aa11□□□□□ -0.65
SNX4-205ENST00000482965 GNAI3P08754 354 aa11□□□□□ -0.65
SNX4-205ENST00000482965 KIAA2012Q0VF49 1180 aa11□□□□□ -0.65
SNX4-205ENST00000482965 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
SNX4-205ENST00000482965 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
SNX4-205ENST00000482965 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
SNX4-205ENST00000482965 ANKRD44Q8N8A2 993 aa11□□□□□ -0.65
SNX4-205ENST00000482965 TBC1D16Q8TBP0 767 aa11□□□□□ -0.65
SNX4-205ENST00000482965 ZNF594Q96JF6 807 aaPredicted RBP11□□□□□ -0.65
SNX4-205ENST00000482965 MEIS3Q99687 375 aa11□□□□□ -0.65
SNX4-205ENST00000482965 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
SNX4-205ENST00000482965 POLLQ9UGP5 575 aa11□□□□□ -0.65
SNX4-205ENST00000482965 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
SNX4-205ENST00000482965 COL4A5P29400 1685 aa11□□□□□ -0.65
SNX4-205ENST00000482965 A0A1B0GUL6 1792 aa11□□□□□ -0.65
SNX4-205ENST00000482965 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
SNX4-205ENST00000482965 WASHC4Q2M389 1173 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 GPR101Q96P66 508 aaPredicted RBP10.99□□□□□ -0.65
SNX4-205ENST00000482965 ANKRD2Q9GZV1 360 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 CNNM1Q9NRU3 951 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
SNX4-205ENST00000482965 ZNF541Q9H0D2 1346 aa10.99□□□□□ -0.65
SNX4-205ENST00000482965 FZD9O00144 591 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 MS4A1P11836 297 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 CHRNDQ07001 517 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 LDHAL6AQ6ZMR3 332 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 ITPRIPQ8IWB1 547 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 ZC3H12CQ9C0D7 883 aaKnown RBP10.98□□□□□ -0.65
SNX4-205ENST00000482965 NMRK2Q9NPI5 230 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 WDR90Q96KV7 1748 aa10.98□□□□□ -0.65
SNX4-205ENST00000482965 G3V3G9 751 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
SNX4-205ENST00000482965 RLBP1P12271 317 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 KCNJ4P48050 445 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 RRAGCQ9HB90 399 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 ZNRF3Q9ULT6 936 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 LEMD3Q9Y2U8 911 aa10.97□□□□□ -0.65
SNX4-205ENST00000482965 SCN4AP35499 1836 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 PLIN1O60240 522 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 GNAI2P04899 355 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.96□□□□□ -0.65
SNX4-205ENST00000482965 HELBQ8NG08 1087 aaPredicted RBP10.96□□□□□ -0.65
SNX4-205ENST00000482965 PANK1Q8TE04 598 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 PUS3Q9BZE2 481 aaKnown RBP10.96□□□□□ -0.65
SNX4-205ENST00000482965 DBNDD1Q9H9R9 158 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
SNX4-205ENST00000482965 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 KIF3CO14782 793 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 ECE2O60344 883 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 TAF5LO75529 589 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
SNX4-205ENST00000482965 CXCL9Q07325 125 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 CIAPIN1Q6FI81 312 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
SNX4-205ENST00000482965 GPC2Q8N158 579 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 SCN9AQ15858 1988 aa10.95□□□□□ -0.66
SNX4-205ENST00000482965 MROH5Q6ZUA9 1318 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 PSME4Q14997 1843 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 WTIPA6NIX2 430 aaPredicted RBP10.94□□□□□ -0.66
SNX4-205ENST00000482965 YDJCA8MPS7 323 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 RAD17O75943 681 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 RFX5P48382 616 aaPredicted RBP10.94□□□□□ -0.66
SNX4-205ENST00000482965 TNIP1Q15025 636 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 METTL24Q5JXM2 366 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
SNX4-205ENST00000482965 RIPOR2Q9Y4F9 1068 aa10.94□□□□□ -0.66
SNX4-205ENST00000482965 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms