RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
COL21A1-209ENST00000482933 SCN4AP35499 1836 aa16.5■□□□□ 0.23
COL21A1-209ENST00000482933 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
COL21A1-209ENST00000482933 HOXB3P14651 431 aaPredicted RBP16.5■□□□□ 0.23
COL21A1-209ENST00000482933 TRIM28Q13263 835 aaKnown RBP16.5■□□□□ 0.23
COL21A1-209ENST00000482933 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
COL21A1-209ENST00000482933 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
COL21A1-209ENST00000482933 LAMB2P55268 1798 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 EIF6P56537 245 aaKnown RBP16.49■□□□□ 0.23
COL21A1-209ENST00000482933 GRAPQ13588 217 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 SUPT20HQ8NEM7 779 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
COL21A1-209ENST00000482933 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
COL21A1-209ENST00000482933 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
COL21A1-209ENST00000482933 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
COL21A1-209ENST00000482933 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
COL21A1-209ENST00000482933 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
COL21A1-209ENST00000482933 GPC2Q8N158 579 aa16.48■□□□□ 0.23
COL21A1-209ENST00000482933 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
COL21A1-209ENST00000482933 HSP90B1P14625 803 aaKnown RBP16.47■□□□□ 0.23
COL21A1-209ENST00000482933 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
COL21A1-209ENST00000482933 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
COL21A1-209ENST00000482933 IL16Q14005 1332 aa16.47■□□□□ 0.23
COL21A1-209ENST00000482933 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 HTRA3P83110 453 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
COL21A1-209ENST00000482933 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
COL21A1-209ENST00000482933 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 TMEM92Q6UXU6 159 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 MPNDQ8N594 471 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 ZBTB38Q8NAP3 1195 aaPredicted RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 MYD88Q99836 296 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 RTFDC1Q9BY42 306 aaPredicted RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
COL21A1-209ENST00000482933 EPHX2P34913 555 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
COL21A1-209ENST00000482933 LMOD1P29536 600 aaPredicted RBP16.44■□□□□ 0.22
COL21A1-209ENST00000482933 TWISTNBQ3B726 338 aaPredicted RBP16.44■□□□□ 0.22
COL21A1-209ENST00000482933 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
COL21A1-209ENST00000482933 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
COL21A1-209ENST00000482933 AOC3Q16853 763 aa16.43■□□□□ 0.22
COL21A1-209ENST00000482933 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
COL21A1-209ENST00000482933 SLC51AQ86UW1 340 aa16.43■□□□□ 0.22
COL21A1-209ENST00000482933 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
COL21A1-209ENST00000482933 CWC25Q9NXE8 425 aaPredicted RBP16.43■□□□□ 0.22
COL21A1-209ENST00000482933 COL4A5P29400 1685 aa16.42■□□□□ 0.22
COL21A1-209ENST00000482933 PCCAP05165 728 aaPredicted RBP16.42■□□□□ 0.22
COL21A1-209ENST00000482933 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
COL21A1-209ENST00000482933 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
COL21A1-209ENST00000482933 HOXB1P14653 301 aaPredicted RBP16.41■□□□□ 0.22
COL21A1-209ENST00000482933 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
COL21A1-209ENST00000482933 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
COL21A1-209ENST00000482933 CELF1Q92879 486 aaKnown RBP16.41■□□□□ 0.22
COL21A1-209ENST00000482933 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
COL21A1-209ENST00000482933 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
COL21A1-209ENST00000482933 TAF1P21675 1872 aa16.4■□□□□ 0.22
COL21A1-209ENST00000482933 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
COL21A1-209ENST00000482933 ZSWIM6Q9HCJ5 1215 aa16.4■□□□□ 0.22
COL21A1-209ENST00000482933 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 PDE8AO60658 829 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
COL21A1-209ENST00000482933 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
COL21A1-209ENST00000482933 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
COL21A1-209ENST00000482933 PASKQ96RG2 1323 aa16.38■□□□□ 0.21
COL21A1-209ENST00000482933 SCNN1DP51172 638 aa16.38■□□□□ 0.21
COL21A1-209ENST00000482933 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
COL21A1-209ENST00000482933 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
COL21A1-209ENST00000482933 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
COL21A1-209ENST00000482933 CXCL9Q07325 125 aa16.37■□□□□ 0.21
COL21A1-209ENST00000482933 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
COL21A1-209ENST00000482933 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
COL21A1-209ENST00000482933 EYA3Q99504 573 aa16.37■□□□□ 0.21
COL21A1-209ENST00000482933 EPS15P42566 896 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 TNIP1Q15025 636 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 USP50Q70EL3 339 aaPredicted RBP16.36■□□□□ 0.21
COL21A1-209ENST00000482933 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 C6orf229H3BNL8 230 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 ITGBL1O95965 494 aaPredicted RBP16.36■□□□□ 0.21
COL21A1-209ENST00000482933 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 FLIIQ13045 1269 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 HS3ST6Q96QI5 342 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms