RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
TSPAN1-208ENST00000482928 MCOLN1Q9GZU1 580 aa15.31■□□□□ 0.04
TSPAN1-208ENST00000482928 BCL2L12Q9HB09 334 aa15.31■□□□□ 0.04
TSPAN1-208ENST00000482928 MYH3P11055 1940 aa15.3■□□□□ 0.04
TSPAN1-208ENST00000482928 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
TSPAN1-208ENST00000482928 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
TSPAN1-208ENST00000482928 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
TSPAN1-208ENST00000482928 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
TSPAN1-208ENST00000482928 CSF1RP07333 972 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 MX1P20591 662 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 ITGA6P23229 1130 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 IL15P40933 162 aaPredicted RBP15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 RFX5P48382 616 aaPredicted RBP15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 HABP4Q5JVS0 413 aaKnown RBP15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 LAMB2P55268 1798 aa15.29■□□□□ 0.04
TSPAN1-208ENST00000482928 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 EYA2O00167 538 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 CIAO1O76071 339 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 SOX10P56693 466 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 ST5P78524 1137 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 AACSQ86V21 672 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 CNNM1Q9NRU3 951 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
TSPAN1-208ENST00000482928 GYS1P13807 737 aa15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 NFIXQ14938 502 aa15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 BMP2KLQ5H9B9 411 aa15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 ZNF594Q96JF6 807 aaPredicted RBP15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 NLRP3Q96P20 1036 aa15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 GREM2Q9H772 168 aa15.27■□□□□ 0.04
TSPAN1-208ENST00000482928 AOX1Q06278 1338 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 ERC2O15083 957 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 PDE1AP54750 535 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 TFCP2Q12800 502 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 CASC1Q6TDU7 716 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 NLGN1Q8N2Q7 840 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 MPHOSPH8Q99549 860 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
TSPAN1-208ENST00000482928 EIF5BO60841 1220 aaKnown RBP15.25■□□□□ 0.03
TSPAN1-208ENST00000482928 SASH1O94885 1247 aa15.25■□□□□ 0.03
TSPAN1-208ENST00000482928 AKAP2Q9Y2D5 859 aa15.25■□□□□ 0.03
TSPAN1-208ENST00000482928 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
TSPAN1-208ENST00000482928 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 BACH2Q9BYV9 841 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 UPF2Q9HAU5 1272 aaKnown RBP15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 TSHZ2Q9NRE2 1034 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 RTL9Q8NET4 1388 aa15.24■□□□□ 0.03
TSPAN1-208ENST00000482928 TRIM6-TRIM34B2RNG4 842 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 SERPINB2P05120 415 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 LRRC24Q50LG9 513 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 STAP2Q9UGK3 403 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 CASP8AP2Q9UKL3 1982 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 ABCC12Q96J65 1359 aa15.23■□□□□ 0.03
TSPAN1-208ENST00000482928 CDC45O75419 566 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 ATG9AQ7Z3C6 839 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 PUS3Q9BZE2 481 aaKnown RBP15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 CCDC8Q9H0W5 538 aaPredicted RBP15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 GPR108Q9NPR9 543 aa15.22■□□□□ 0.03
TSPAN1-208ENST00000482928 MROH5Q6ZUA9 1318 aa15.21■□□□□ 0.03
TSPAN1-208ENST00000482928 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
TSPAN1-208ENST00000482928 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
TSPAN1-208ENST00000482928 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
TSPAN1-208ENST00000482928 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
TSPAN1-208ENST00000482928 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.02
TSPAN1-208ENST00000482928 A0A0G2JLW4 131 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 TM4SF1P30408 202 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 DGKZQ13574 1117 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 PRR5LQ6MZQ0 368 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 CCDC24Q8N4L8 307 aa15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 EAF2Q96CJ1 260 aaPredicted RBP15.2■□□□□ 0.02
TSPAN1-208ENST00000482928 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms