RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 SF3B3Q15393 1217 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 H7C1W4 665 aa12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 BCAR3O75815 825 aa12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1-206ENST00000482632 GRM8O00222 908 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 BBOX1O75936 387 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 COL4A1P02462 1669 aa12.61□□□□□ -0.39
SPTLC1-206ENST00000482632 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
SPTLC1-206ENST00000482632 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
SPTLC1-206ENST00000482632 GREM2Q9H772 168 aa12.6□□□□□ -0.39
SPTLC1-206ENST00000482632 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
SPTLC1-206ENST00000482632 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 PRELPP51888 382 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 SP8Q8IXZ3 490 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 MPNDQ8N594 471 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 TTLL11Q8NHH1 800 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
SPTLC1-206ENST00000482632 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 ITGA6P23229 1130 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 CCT4P50991 539 aaKnown RBP12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 CASP7P55210 303 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 STK24Q9Y6E0 443 aa12.58□□□□□ -0.4
SPTLC1-206ENST00000482632 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 AOC3Q16853 763 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 FTSJ3Q8IY81 847 aaKnown RBP12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 PSMD1Q99460 953 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
SPTLC1-206ENST00000482632 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 GPSM2P81274 684 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 FOXO4P98177 505 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 KDM2BQ8NHM5 1336 aa12.56□□□□□ -0.4
SPTLC1-206ENST00000482632 G3V3G9 751 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 MAP3K13O43283 966 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 UFL1O94874 794 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 TRIM27P14373 513 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 GPR101Q96P66 508 aaPredicted RBP12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
SPTLC1-206ENST00000482632 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 GGA1Q9UJY5 639 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
SPTLC1-206ENST00000482632 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 PLIN1O60240 522 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 CSF1RP07333 972 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 KCNJ4P48050 445 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms