RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 TTC6Q86TZ1 520 aa17.71■□□□□ 0.43
ATG4B-220ENST00000482507 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
ATG4B-220ENST00000482507 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
ATG4B-220ENST00000482507 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 RPS6KB1P23443 525 aa17.7■□□□□ 0.42
ATG4B-220ENST00000482507 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
ATG4B-220ENST00000482507 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 UQCRHLA0A096LP55 91 aa17.7■□□□□ 0.42
ATG4B-220ENST00000482507 UQCRHP07919 91 aa17.7■□□□□ 0.42
ATG4B-220ENST00000482507 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
ATG4B-220ENST00000482507 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 DBNLQ9UJU6 430 aaKnown RBP17.7■□□□□ 0.42
ATG4B-220ENST00000482507 KDM4AO75164 1064 aa17.69■□□□□ 0.42
ATG4B-220ENST00000482507 TAF5LO75529 589 aa17.69■□□□□ 0.42
ATG4B-220ENST00000482507 PSMA5P28066 241 aa17.69■□□□□ 0.42
ATG4B-220ENST00000482507 TTC12Q9H892 705 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-220ENST00000482507 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-220ENST00000482507 C17orf53Q8N3J3 647 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-220ENST00000482507 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
ATG4B-220ENST00000482507 BCL9O00512 1426 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 NEXNQ0ZGT2 675 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
ATG4B-220ENST00000482507 TFCP2Q12800 502 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 STK3Q13188 491 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
ATG4B-220ENST00000482507 LIG1P18858 919 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 KCNQ4P56696 695 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 COPRSQ9NQ92 184 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 A1BGP04217 495 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
ATG4B-220ENST00000482507 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-220ENST00000482507 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 TNNI3KQ59H18 835 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 RNF20Q5VTR2 975 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 SEC62Q99442 399 aaKnown RBP17.66■□□□□ 0.42
ATG4B-220ENST00000482507 FPGT-TNNI3KV9GXZ4 949 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 WNK3Q9BYP7 1800 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 ATP5JP18859 108 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 ZNF609O15014 1411 aa17.66■□□□□ 0.42
ATG4B-220ENST00000482507 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
ATG4B-220ENST00000482507 KRT85P78386 507 aa17.65■□□□□ 0.42
ATG4B-220ENST00000482507 POTEAQ6S8J7 498 aa17.65■□□□□ 0.42
ATG4B-220ENST00000482507 SASS6Q6UVJ0 657 aa17.65■□□□□ 0.42
ATG4B-220ENST00000482507 PIBF1Q8WXW3 757 aa17.65■□□□□ 0.42
ATG4B-220ENST00000482507 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
ATG4B-220ENST00000482507 JAK2O60674 1132 aa17.64■□□□□ 0.42
ATG4B-220ENST00000482507 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.42
ATG4B-220ENST00000482507 DBNDD2Q9BQY9 259 aa17.64■□□□□ 0.42
ATG4B-220ENST00000482507 PDCL3Q9H2J4 239 aa17.64■□□□□ 0.42
ATG4B-220ENST00000482507 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.64■□□□□ 0.41
ATG4B-220ENST00000482507 PLCB2Q00722 1185 aa17.64■□□□□ 0.41
ATG4B-220ENST00000482507 ANKRD1Q15327 319 aa17.64■□□□□ 0.41
ATG4B-220ENST00000482507 CAMK4Q16566 473 aa17.64■□□□□ 0.41
ATG4B-220ENST00000482507 FAM13BQ9NYF5 915 aa17.64■□□□□ 0.41
ATG4B-220ENST00000482507 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-220ENST00000482507 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
ATG4B-220ENST00000482507 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-220ENST00000482507 ELP1O95163 1332 aa17.63■□□□□ 0.41
ATG4B-220ENST00000482507 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
ATG4B-220ENST00000482507 NBPF14Q5TI25 921 aa17.63■□□□□ 0.41
ATG4B-220ENST00000482507 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
ATG4B-220ENST00000482507 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
ATG4B-220ENST00000482507 PDCP20941 246 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 RXRBP28702 533 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 CASP7P55210 303 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 NOLC1Q14978 699 aaKnown RBP eCLIP17.62■□□□□ 0.41
ATG4B-220ENST00000482507 SLFNL1Q499Z3 407 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
ATG4B-220ENST00000482507 KCNF1Q9H3M0 494 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
ATG4B-220ENST00000482507 CYP21A2P08686 494 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 MRVI1Q9Y6F6 885 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 A0A087WZG4 1122 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
ATG4B-220ENST00000482507 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-220ENST00000482507 GTF3C6Q969F1 213 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
ATG4B-220ENST00000482507 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 THSD7AQ9UPZ6 1657 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 DOT1LQ8TEK3 1739 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 ITGB4P16144 1822 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 AFDNP55196 1824 aaKnown RBP17.6■□□□□ 0.41
ATG4B-220ENST00000482507 TYRO3Q06418 890 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms