RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 YDJCA8MPS7 323 aa19.92■□□□□ 0.78
COL16A1-212ENST00000482478 H7C1W4 665 aa19.92■□□□□ 0.78
COL16A1-212ENST00000482478 IGHMBP2P38935 993 aaKnown RBP19.92■□□□□ 0.78
COL16A1-212ENST00000482478 EPS15P42566 896 aa19.92■□□□□ 0.78
COL16A1-212ENST00000482478 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
COL16A1-212ENST00000482478 GPRC5DQ9NZD1 345 aa19.92■□□□□ 0.78
COL16A1-212ENST00000482478 CHMP3Q9Y3E7 222 aa19.92■□□□□ 0.78
COL16A1-212ENST00000482478 DOK7Q18PE1 504 aa19.91■□□□□ 0.78
COL16A1-212ENST00000482478 PODXL2Q9NZ53 605 aa19.91■□□□□ 0.78
COL16A1-212ENST00000482478 ITGA6P23229 1130 aa19.9■□□□□ 0.78
COL16A1-212ENST00000482478 BEND3Q5T5X7 828 aa19.9■□□□□ 0.78
COL16A1-212ENST00000482478 PLA2G12BQ9BX93 195 aa19.9■□□□□ 0.78
COL16A1-212ENST00000482478 ZC3H12CQ9C0D7 883 aaKnown RBP19.9■□□□□ 0.78
COL16A1-212ENST00000482478 ADARB2Q9NS39 739 aaKnown RBP19.9■□□□□ 0.78
COL16A1-212ENST00000482478 USP50Q70EL3 339 aaPredicted RBP19.89■□□□□ 0.77
COL16A1-212ENST00000482478 PASKQ96RG2 1323 aa19.89■□□□□ 0.77
COL16A1-212ENST00000482478 CREBZFQ9NS37 354 aa19.89■□□□□ 0.77
COL16A1-212ENST00000482478 PSMD14O00487 310 aa19.88■□□□□ 0.77
COL16A1-212ENST00000482478 CASP7P55210 303 aa19.88■□□□□ 0.77
COL16A1-212ENST00000482478 MPHOSPH8Q99549 860 aa19.88■□□□□ 0.77
COL16A1-212ENST00000482478 SRCIN1Q9C0H9 1055 aa19.88■□□□□ 0.77
COL16A1-212ENST00000482478 MED23Q9ULK4 1368 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 GRM8O00222 908 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 ATP2B4P23634 1241 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 SLFN5Q08AF3 891 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 MICALL2Q8IY33 904 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 DNAJC5GQ8N7S2 189 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
COL16A1-212ENST00000482478 BSDC1Q9NW68 430 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-212ENST00000482478 C9orf78Q9NZ63 289 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-212ENST00000482478 PTPRCP08575 1304 aa19.86■□□□□ 0.77
COL16A1-212ENST00000482478 ANKRD18BA2A2Z9 1011 aa19.86■□□□□ 0.77
COL16A1-212ENST00000482478 SMC4Q9NTJ3 1288 aa19.86■□□□□ 0.77
COL16A1-212ENST00000482478 ZBTB12Q9Y330 459 aaPredicted RBP19.86■□□□□ 0.77
COL16A1-212ENST00000482478 ALDH1L1O75891 902 aa19.85■□□□□ 0.77
COL16A1-212ENST00000482478 KCNJ4P48050 445 aa19.85■□□□□ 0.77
COL16A1-212ENST00000482478 TAF7LQ5H9L4 462 aa19.85■□□□□ 0.77
COL16A1-212ENST00000482478 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
COL16A1-212ENST00000482478 TRPM4Q8TD43 1214 aa19.85■□□□□ 0.77
COL16A1-212ENST00000482478 MKRN1Q9UHC7 482 aaKnown RBP19.85■□□□□ 0.77
COL16A1-212ENST00000482478 MINPP1Q9UNW1 487 aa19.85■□□□□ 0.77
COL16A1-212ENST00000482478 SCN9AQ15858 1988 aa19.84■□□□□ 0.77
COL16A1-212ENST00000482478 SHTN1A0MZ66 631 aa19.84■□□□□ 0.77
COL16A1-212ENST00000482478 TMEM88BA6NKF7 163 aa19.84■□□□□ 0.77
COL16A1-212ENST00000482478 H7C1D1 291 aa19.84■□□□□ 0.77
COL16A1-212ENST00000482478 IFIT5Q13325 482 aaKnown RBP19.84■□□□□ 0.77
COL16A1-212ENST00000482478 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
COL16A1-212ENST00000482478 A0A1B0GUL6 1792 aa19.83■□□□□ 0.77
COL16A1-212ENST00000482478 ITGBL1O95965 494 aaPredicted RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 RPS12P25398 132 aaKnown RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 CCT4P50991 539 aaKnown RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 FBXW7Q969H0 707 aa19.83■□□□□ 0.77
COL16A1-212ENST00000482478 CNOT7Q9UIV1 285 aaKnown RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 ABT1Q9ULW3 272 aaKnown RBP19.83■□□□□ 0.77
COL16A1-212ENST00000482478 PSME4Q14997 1843 aa19.82■□□□□ 0.76
COL16A1-212ENST00000482478 CSF1RP07333 972 aa19.82■□□□□ 0.76
COL16A1-212ENST00000482478 ANKRD2Q9GZV1 360 aa19.82■□□□□ 0.76
COL16A1-212ENST00000482478 CNTNAP1P78357 1384 aa19.82■□□□□ 0.76
COL16A1-212ENST00000482478 CCDC57Q2TAC2 916 aa19.81■□□□□ 0.76
COL16A1-212ENST00000482478 LMBR1LQ6UX01 489 aa19.81■□□□□ 0.76
COL16A1-212ENST00000482478 KCNQ5Q9NR82 932 aa19.81■□□□□ 0.76
COL16A1-212ENST00000482478 ZNF804BA4D1E1 1349 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 TRAF5O00463 557 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 FOXO4P98177 505 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 CHRNDQ07001 517 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 ALDH1L2Q3SY69 923 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 TBC1D10BQ4KMP7 808 aaPredicted RBP19.8■□□□□ 0.76
COL16A1-212ENST00000482478 JMYQ8N9B5 988 aa19.8■□□□□ 0.76
COL16A1-212ENST00000482478 ZNF609O15014 1411 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 KIF4BQ2VIQ3 1234 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 EPHA10Q5JZY3 1008 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 PAXIP1Q6ZW49 1069 aaPredicted RBP19.79■□□□□ 0.76
COL16A1-212ENST00000482478 SAMD7Q7Z3H4 446 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 DPF2Q92785 391 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 SUCLG2Q96I99 432 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 LEMD3Q9Y2U8 911 aa19.79■□□□□ 0.76
COL16A1-212ENST00000482478 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-212ENST00000482478 KLRK1P26718 216 aa19.78■□□□□ 0.76
COL16A1-212ENST00000482478 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-212ENST00000482478 GLIS2Q9BZE0 524 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-212ENST00000482478 ZNF408Q9H9D4 720 aa19.78■□□□□ 0.76
COL16A1-212ENST00000482478 CNNM1Q9NRU3 951 aa19.78■□□□□ 0.76
COL16A1-212ENST00000482478 WTIPA6NIX2 430 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-212ENST00000482478 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-212ENST00000482478 RBM26Q5T8P6 1007 aaKnown RBP19.77■□□□□ 0.76
COL16A1-212ENST00000482478 PODNQ7Z5L7 613 aa19.77■□□□□ 0.76
COL16A1-212ENST00000482478 TRPM7Q96QT4 1865 aa19.77■□□□□ 0.76
COL16A1-212ENST00000482478 USP17L3A6NCW0 530 aa19.76■□□□□ 0.75
COL16A1-212ENST00000482478 USP17L4A6NCW7 530 aa19.76■□□□□ 0.75
COL16A1-212ENST00000482478 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
COL16A1-212ENST00000482478 HIRAP54198 1017 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-212ENST00000482478 FMR1Q06787 632 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL16A1-212ENST00000482478 USP17L1Q7RTZ2 530 aa19.76■□□□□ 0.75
COL16A1-212ENST00000482478 MIER1Q8N108 512 aa19.76■□□□□ 0.75
COL16A1-212ENST00000482478 ZC3H15Q8WU90 426 aaKnown RBP19.76■□□□□ 0.75
COL16A1-212ENST00000482478 ZNF594Q96JF6 807 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-212ENST00000482478 COA1Q9GZY4 146 aa19.76■□□□□ 0.75
COL16A1-212ENST00000482478 TAF5LO75529 589 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms