RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 METTL24Q5JXM2 366 aa28.55■■■□□ 2.16
SHISA4-203ENST00000481699 ZNF219Q9P2Y4 722 aaPredicted RBP28.55■■■□□ 2.16
SHISA4-203ENST00000481699 WWC3Q9ULE0 1092 aa28.55■■■□□ 2.16
SHISA4-203ENST00000481699 MROH5Q6ZUA9 1318 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 APBB1O00213 710 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 RAB11FIP3O75154 756 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 GCC1Q96CN9 775 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 DCTPP1Q9H773 170 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 ATP6V0A2Q9Y487 856 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 DLEC1Q9Y238 1755 aa28.54■■■□□ 2.16
SHISA4-203ENST00000481699 IGHDP01880 384 aa28.53■■■□□ 2.16
SHISA4-203ENST00000481699 SP8Q8IXZ3 490 aa28.53■■■□□ 2.16
SHISA4-203ENST00000481699 ANKRD2Q9GZV1 360 aa28.53■■■□□ 2.16
SHISA4-203ENST00000481699 CEP126Q9P2H0 1117 aa28.53■■■□□ 2.16
SHISA4-203ENST00000481699 BCS1LQ9Y276 419 aa28.53■■■□□ 2.16
SHISA4-203ENST00000481699 KIAA1551Q9HCM1 1747 aa28.52■■■□□ 2.16
SHISA4-203ENST00000481699 ANKIB1Q9P2G1 1089 aa28.52■■■□□ 2.16
SHISA4-203ENST00000481699 RIPOR2Q9Y4F9 1068 aa28.52■■■□□ 2.16
SHISA4-203ENST00000481699 GTF3C3Q9Y5Q9 886 aa28.52■■■□□ 2.16
SHISA4-203ENST00000481699 SOGA3Q5TF21 947 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 CC2D2BQ6DHV5 1058 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 ATG9AQ7Z3C6 839 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 MINPP1Q9UNW1 487 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 CHD4Q14839 1912 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 TAF1P21675 1872 aa28.51■■■□□ 2.15
SHISA4-203ENST00000481699 C21orf2O43822 256 aa28.5■■■□□ 2.15
SHISA4-203ENST00000481699 CHRNDQ07001 517 aa28.5■■■□□ 2.15
SHISA4-203ENST00000481699 B4GALNT3Q6L9W6 998 aa28.5■■■□□ 2.15
SHISA4-203ENST00000481699 SPEF2Q9C093 1822 aa28.5■■■□□ 2.15
SHISA4-203ENST00000481699 COL4A1P02462 1669 aa28.49■■■□□ 2.15
SHISA4-203ENST00000481699 KCNJ4P48050 445 aa28.49■■■□□ 2.15
SHISA4-203ENST00000481699 KIF1BPQ96EK5 621 aa28.49■■■□□ 2.15
SHISA4-203ENST00000481699 CCDC93Q567U6 631 aa28.48■■■□□ 2.15
SHISA4-203ENST00000481699 PELP1Q8IZL8 1130 aaKnown RBP28.48■■■□□ 2.15
SHISA4-203ENST00000481699 HELBQ8NG08 1087 aaPredicted RBP28.48■■■□□ 2.15
SHISA4-203ENST00000481699 LRRCC1Q9C099 1032 aa28.48■■■□□ 2.15
SHISA4-203ENST00000481699 BCL11AQ9H165 835 aa28.48■■■□□ 2.15
SHISA4-203ENST00000481699 NSFL1CQ9UNZ2 370 aaKnown RBP28.48■■■□□ 2.15
SHISA4-203ENST00000481699 XDHP47989 1333 aa28.47■■■□□ 2.15
SHISA4-203ENST00000481699 C1QTNF8P60827 252 aa28.47■■■□□ 2.15
SHISA4-203ENST00000481699 TFCP2Q12800 502 aa28.47■■■□□ 2.15
SHISA4-203ENST00000481699 GRIPAP1Q4V328 841 aa28.47■■■□□ 2.15
SHISA4-203ENST00000481699 CENPQQ7L2Z9 268 aaPredicted RBP28.47■■■□□ 2.15
SHISA4-203ENST00000481699 CACNA1SQ13698 1873 aa28.46■■■□□ 2.15
SHISA4-203ENST00000481699 DPP8Q6V1X1 898 aaPredicted RBP28.46■■■□□ 2.15
SHISA4-203ENST00000481699 MPNDQ8N594 471 aa28.46■■■□□ 2.15
SHISA4-203ENST00000481699 RHPN1Q8TCX5 695 aa28.46■■■□□ 2.15
SHISA4-203ENST00000481699 AKAP2Q9Y2D5 859 aa28.46■■■□□ 2.15
SHISA4-203ENST00000481699 SLX4Q8IY92 1834 aa28.46■■■□□ 2.15
SHISA4-203ENST00000481699 TAF5LO75529 589 aa28.45■■■□□ 2.14
SHISA4-203ENST00000481699 GPSM2P81274 684 aa28.45■■■□□ 2.14
SHISA4-203ENST00000481699 ANKRD45Q5TZF3 282 aa28.45■■■□□ 2.14
SHISA4-203ENST00000481699 SMC5Q8IY18 1101 aa28.45■■■□□ 2.14
SHISA4-203ENST00000481699 RTKN2Q8IZC4 609 aa28.45■■■□□ 2.14
SHISA4-203ENST00000481699 SASH1O94885 1247 aa28.44■■■□□ 2.14
SHISA4-203ENST00000481699 PDE8BO95263 885 aa28.44■■■□□ 2.14
SHISA4-203ENST00000481699 OLFM4Q6UX06 510 aa28.44■■■□□ 2.14
SHISA4-203ENST00000481699 C7orf43Q8WVR3 580 aa28.44■■■□□ 2.14
SHISA4-203ENST00000481699 GGA1Q9UJY5 639 aa28.44■■■□□ 2.14
SHISA4-203ENST00000481699 ATP2B4P23634 1241 aa28.43■■■□□ 2.14
SHISA4-203ENST00000481699 PUM3Q15397 648 aaKnown RBP28.43■■■□□ 2.14
SHISA4-203ENST00000481699 CLASRPQ8N2M8 674 aaKnown RBP28.43■■■□□ 2.14
SHISA4-203ENST00000481699 LEMD3Q9Y2U8 911 aa28.43■■■□□ 2.14
SHISA4-203ENST00000481699 C6orf229H3BNL8 230 aa28.42■■■□□ 2.14
SHISA4-203ENST00000481699 UFL1O94874 794 aa28.42■■■□□ 2.14
SHISA4-203ENST00000481699 IL1RAPL2Q9NP60 686 aa28.42■■■□□ 2.14
SHISA4-203ENST00000481699 ATP2B3Q16720 1220 aa28.41■■■□□ 2.14
SHISA4-203ENST00000481699 SLC51AQ86UW1 340 aa28.41■■■□□ 2.14
SHISA4-203ENST00000481699 PODXL2Q9NZ53 605 aa28.41■■■□□ 2.14
SHISA4-203ENST00000481699 IFIT1P09914 478 aaKnown RBP28.4■■■□□ 2.14
SHISA4-203ENST00000481699 SLC5A1P13866 664 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 UBE4AQ14139 1066 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 VGLL2Q8N8G2 317 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 GPR108Q9NPR9 543 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 BRCA1P38398 1863 aaKnown RBP28.4■■■□□ 2.14
SHISA4-203ENST00000481699 ZNF804BA4D1E1 1349 aa28.4■■■□□ 2.14
SHISA4-203ENST00000481699 LRRC37AA6NMS7 1700 aa28.39■■■□□ 2.14
SHISA4-203ENST00000481699 SMARCA5O60264 1052 aaPredicted RBP28.39■■■□□ 2.14
SHISA4-203ENST00000481699 GPR162Q16538 588 aa28.39■■■□□ 2.14
SHISA4-203ENST00000481699 LPIN2Q92539 896 aa28.39■■■□□ 2.14
SHISA4-203ENST00000481699 NEUROD6Q96NK8 337 aa28.39■■■□□ 2.14
SHISA4-203ENST00000481699 KDM2BQ8NHM5 1336 aa28.39■■■□□ 2.13
SHISA4-203ENST00000481699 IFIT2P09913 472 aaKnown RBP28.38■■■□□ 2.13
SHISA4-203ENST00000481699 TNNI3KQ59H18 835 aa28.38■■■□□ 2.13
SHISA4-203ENST00000481699 AACSQ86V21 672 aa28.38■■■□□ 2.13
SHISA4-203ENST00000481699 EYA3Q99504 573 aa28.38■■■□□ 2.13
SHISA4-203ENST00000481699 FPGT-TNNI3KV9GXZ4 949 aa28.38■■■□□ 2.13
SHISA4-203ENST00000481699 NUCB1Q02818 461 aa28.37■■■□□ 2.13
SHISA4-203ENST00000481699 GORABQ5T7V8 394 aa28.37■■■□□ 2.13
SHISA4-203ENST00000481699 TBC1D16Q8TBP0 767 aa28.37■■■□□ 2.13
SHISA4-203ENST00000481699 A0A1B0GUL7 405 aa28.36■■■□□ 2.13
SHISA4-203ENST00000481699 CHD1LQ86WJ1 897 aa28.36■■■□□ 2.13
SHISA4-203ENST00000481699 FKBP4Q02790 459 aaKnown RBP eCLIP28.35■■■□□ 2.13
SHISA4-203ENST00000481699 ARHGAP27Q6ZUM4 889 aa28.35■■■□□ 2.13
SHISA4-203ENST00000481699 LNPKQ9C0E8 428 aa28.35■■■□□ 2.13
SHISA4-203ENST00000481699 POLLQ9UGP5 575 aa28.35■■■□□ 2.13
SHISA4-203ENST00000481699 ZNF609O15014 1411 aa28.35■■■□□ 2.13
SHISA4-203ENST00000481699 SNAP23O00161 211 aa28.34■■■□□ 2.13
SHISA4-203ENST00000481699 TIMM10P62072 90 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms