RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 WDR63Q8IWG1 891 aa23.8■■□□□ 1.4
CLK1-211ENST00000481641 EYA3Q99504 573 aa23.8■■□□□ 1.4
CLK1-211ENST00000481641 ANKIB1Q9P2G1 1089 aa23.8■■□□□ 1.4
CLK1-211ENST00000481641 ABT1Q9ULW3 272 aaKnown RBP23.8■■□□□ 1.4
CLK1-211ENST00000481641 VAMP4O75379 141 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 UFL1O94874 794 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 CTSWP56202 376 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 FLIIQ13045 1269 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 DEFB115Q30KQ5 88 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 PODXL2Q9NZ53 605 aa23.79■■□□□ 1.4
CLK1-211ENST00000481641 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 RASSF10A6NK89 507 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 CST9Q5W186 159 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 MICALL2Q8IY33 904 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 GLIS2Q9BZE0 524 aaPredicted RBP23.78■■□□□ 1.4
CLK1-211ENST00000481641 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
CLK1-211ENST00000481641 GGA1Q9UJY5 639 aa23.78■■□□□ 1.4
CLK1-211ENST00000481641 UBE3BQ7Z3V4 1068 aa23.77■■□□□ 1.4
CLK1-211ENST00000481641 TTLL11Q8NHH1 800 aa23.77■■□□□ 1.4
CLK1-211ENST00000481641 GREM2Q9H772 168 aa23.77■■□□□ 1.4
CLK1-211ENST00000481641 H7C1D1 291 aa23.76■■□□□ 1.39
CLK1-211ENST00000481641 H7C1W4 665 aa23.76■■□□□ 1.39
CLK1-211ENST00000481641 FKBP5Q13451 457 aaPredicted RBP23.76■■□□□ 1.39
CLK1-211ENST00000481641 SAMD7Q7Z3H4 446 aa23.76■■□□□ 1.39
CLK1-211ENST00000481641 TRPM7Q96QT4 1865 aa23.76■■□□□ 1.39
CLK1-211ENST00000481641 SCN9AQ15858 1988 aa23.76■■□□□ 1.39
CLK1-211ENST00000481641 MYH3P11055 1940 aa23.75■■□□□ 1.39
CLK1-211ENST00000481641 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
CLK1-211ENST00000481641 PGAP2Q9UHJ9 254 aa23.75■■□□□ 1.39
CLK1-211ENST00000481641 FOXN1O15353 648 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 EGFRP00533 1210 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 GCKRQ14397 625 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 DNAAF4Q8WXU2 420 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 DPF2Q92785 391 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 SPEF2Q9C093 1822 aa23.74■■□□□ 1.39
CLK1-211ENST00000481641 G3V3G9 751 aa23.73■■□□□ 1.39
CLK1-211ENST00000481641 TBC1D10BQ4KMP7 808 aaPredicted RBP23.73■■□□□ 1.39
CLK1-211ENST00000481641 RBM26Q5T8P6 1007 aaKnown RBP23.73■■□□□ 1.39
CLK1-211ENST00000481641 DCAF8Q5TAQ9 597 aa23.73■■□□□ 1.39
CLK1-211ENST00000481641 DLK2Q6UY11 383 aa23.73■■□□□ 1.39
CLK1-211ENST00000481641 CDC5LQ99459 802 aaKnown RBP23.73■■□□□ 1.39
CLK1-211ENST00000481641 XDHP47989 1333 aa23.73■■□□□ 1.39
CLK1-211ENST00000481641 WDR33Q9C0J8 1336 aaKnown RBP23.73■■□□□ 1.39
CLK1-211ENST00000481641 CELF2O95319 508 aaKnown RBP23.72■■□□□ 1.39
CLK1-211ENST00000481641 PAXIP1Q6ZW49 1069 aaPredicted RBP23.72■■□□□ 1.39
CLK1-211ENST00000481641 TNS4Q8IZW8 715 aa23.72■■□□□ 1.39
CLK1-211ENST00000481641 ZC3H15Q8WU90 426 aaKnown RBP23.72■■□□□ 1.39
CLK1-211ENST00000481641 CACNA1FO60840 1977 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 CASP7P55210 303 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 GRM1Q13255 1194 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 CYP4F22Q6NT55 531 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 ZNF408Q9H9D4 720 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 MINPP1Q9UNW1 487 aa23.71■■□□□ 1.39
CLK1-211ENST00000481641 F6X3S4 739 aa23.7■■□□□ 1.38
CLK1-211ENST00000481641 VIL1P09327 827 aaKnown RBP23.7■■□□□ 1.38
CLK1-211ENST00000481641 ATP2B4P23634 1241 aa23.7■■□□□ 1.38
CLK1-211ENST00000481641 USP48Q86UV5 1035 aa23.7■■□□□ 1.38
CLK1-211ENST00000481641 BSDC1Q9NW68 430 aaPredicted RBP23.7■■□□□ 1.38
CLK1-211ENST00000481641 TLL2Q9Y6L7 1015 aa23.7■■□□□ 1.38
CLK1-211ENST00000481641 RPS12P25398 132 aaKnown RBP23.69■■□□□ 1.38
CLK1-211ENST00000481641 CDC37L1Q7L3B6 337 aa23.69■■□□□ 1.38
CLK1-211ENST00000481641 LINS1Q8NG48 757 aa23.69■■□□□ 1.38
CLK1-211ENST00000481641 CAPNS2Q96L46 248 aa23.69■■□□□ 1.38
CLK1-211ENST00000481641 WBP1LQ9NX94 342 aa23.69■■□□□ 1.38
CLK1-211ENST00000481641 POLR2AP24928 1970 aaKnown RBP23.69■■□□□ 1.38
CLK1-211ENST00000481641 FAM161AQ3B820 660 aa23.68■■□□□ 1.38
CLK1-211ENST00000481641 PLA2G12BQ9BX93 195 aa23.68■■□□□ 1.38
CLK1-211ENST00000481641 MYH16Q9H6N6 1097 aa23.68■■□□□ 1.38
CLK1-211ENST00000481641 ITGA6P23229 1130 aa23.67■■□□□ 1.38
CLK1-211ENST00000481641 AIDAQ96BJ3 306 aa23.67■■□□□ 1.38
CLK1-211ENST00000481641 CAPN15O75808 1086 aa23.66■■□□□ 1.38
CLK1-211ENST00000481641 ASTN2O75129 1339 aaPredicted RBP23.65■■□□□ 1.38
CLK1-211ENST00000481641 CSF1RP07333 972 aa23.65■■□□□ 1.38
CLK1-211ENST00000481641 IGHMBP2P38935 993 aaKnown RBP23.65■■□□□ 1.38
CLK1-211ENST00000481641 CCT4P50991 539 aaKnown RBP23.65■■□□□ 1.38
CLK1-211ENST00000481641 KIF4BQ2VIQ3 1234 aa23.65■■□□□ 1.38
CLK1-211ENST00000481641 BEND3Q5T5X7 828 aa23.65■■□□□ 1.38
CLK1-211ENST00000481641 RSBN1LQ6PCB5 846 aaPredicted RBP23.65■■□□□ 1.38
CLK1-211ENST00000481641 SAPCD2Q86UD0 394 aa23.65■■□□□ 1.38
CLK1-211ENST00000481641 AOC2O75106 756 aa23.64■■□□□ 1.37
CLK1-211ENST00000481641 CTCFP49711 727 aaPredicted RBP23.64■■□□□ 1.37
CLK1-211ENST00000481641 KRT26Q7Z3Y9 468 aa23.64■■□□□ 1.37
CLK1-211ENST00000481641 ADM5C9JUS6 153 aa23.63■■□□□ 1.37
CLK1-211ENST00000481641 ECE1P42892 770 aa23.63■■□□□ 1.37
CLK1-211ENST00000481641 TXNRD3Q86VQ6 643 aa23.63■■□□□ 1.37
CLK1-211ENST00000481641 PSME4Q14997 1843 aa23.63■■□□□ 1.37
CLK1-211ENST00000481641 MED23Q9ULK4 1368 aa23.63■■□□□ 1.37
CLK1-211ENST00000481641 USP17L3A6NCW0 530 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 USP17L4A6NCW7 530 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 LBX1P52954 281 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 USP17L1Q7RTZ2 530 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 PODNQ7Z5L7 613 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 AGBL3Q8NEM8 1001 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 GMLQ99445 158 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 MXD3Q9BW11 206 aa23.62■■□□□ 1.37
CLK1-211ENST00000481641 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
CLK1-211ENST00000481641 KLRK1P26718 216 aa23.61■■□□□ 1.37
CLK1-211ENST00000481641 FOXO4P98177 505 aa23.61■■□□□ 1.37
CLK1-211ENST00000481641 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms