RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 NAA30Q147X3 362 aaPredicted RBP6.79□□□□□ -1.32
CBX3-207ENST00000481300 C16orf46Q6P387 395 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 ELMSAN1Q6PJG2 1045 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
CBX3-207ENST00000481300 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
CBX3-207ENST00000481300 MMP20O60882 483 aa6.78□□□□□ -1.32
CBX3-207ENST00000481300 TRIP4Q15650 581 aaPredicted RBP6.78□□□□□ -1.32
CBX3-207ENST00000481300 TXNRD3Q86VQ6 643 aa6.78□□□□□ -1.32
CBX3-207ENST00000481300 GTF3C2Q8WUA4 911 aaPredicted RBP6.78□□□□□ -1.32
CBX3-207ENST00000481300 TTC9Q92623 222 aa6.78□□□□□ -1.32
CBX3-207ENST00000481300 SMG9Q9H0W8 520 aaKnown RBP6.78□□□□□ -1.32
CBX3-207ENST00000481300 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
CBX3-207ENST00000481300 FOXD4L6Q3SYB3 417 aaPredicted RBP6.77□□□□□ -1.33
CBX3-207ENST00000481300 FOXD4L3Q6VB84 417 aaPredicted RBP6.77□□□□□ -1.33
CBX3-207ENST00000481300 DTWD1Q8N5C7 304 aa6.77□□□□□ -1.33
CBX3-207ENST00000481300 J3QW42 95 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 HOXD8P13378 290 aaPredicted RBP6.76□□□□□ -1.33
CBX3-207ENST00000481300 BRD2P25440 801 aaKnown RBP6.76□□□□□ -1.33
CBX3-207ENST00000481300 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
CBX3-207ENST00000481300 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
CBX3-207ENST00000481300 TMCO4Q5TGY1 634 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 FBXO11Q86XK2 927 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
CBX3-207ENST00000481300 EGFL7Q9UHF1 273 aa6.76□□□□□ -1.33
CBX3-207ENST00000481300 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 H3BRB1 525 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
CBX3-207ENST00000481300 SOX18P35713 384 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 SIK1P57059 783 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
CBX3-207ENST00000481300 ZMYM1Q5SVZ6 1142 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 SND1Q7KZF4 910 aaKnown RBP eCLIP6.75□□□□□ -1.33
CBX3-207ENST00000481300 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 PLD4Q96BZ4 506 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
CBX3-207ENST00000481300 TUT1Q9H6E5 874 aaKnown RBP6.75□□□□□ -1.33
CBX3-207ENST00000481300 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
CBX3-207ENST00000481300 USP21Q9UK80 565 aa6.75□□□□□ -1.33
CBX3-207ENST00000481300 SOWAHDA6NJG2 315 aa6.74□□□□□ -1.33
CBX3-207ENST00000481300 PSAPP07602 524 aa6.74□□□□□ -1.33
CBX3-207ENST00000481300 FKBP4Q02790 459 aaKnown RBP eCLIP6.74□□□□□ -1.33
CBX3-207ENST00000481300 PRSS36Q5K4E3 855 aa6.74□□□□□ -1.33
CBX3-207ENST00000481300 ZBTB39O15060 712 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 ICMTO60725 284 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 MTMR3Q13615 1198 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 NLRP13Q86W25 1043 aa6.73□□□□□ -1.33
CBX3-207ENST00000481300 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
CBX3-207ENST00000481300 UBAP1LF5GYI3 381 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 DLL1O00548 723 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 ZAP70P43403 619 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 WFDC12Q8WWY7 111 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 TP53INP1Q96A56 240 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 STIM2Q9P246 746 aa6.72□□□□□ -1.33
CBX3-207ENST00000481300 FAM13AO94988 1023 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 GHRHP01286 108 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 NOS3P29474 1203 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 IREB2P48200 963 aaKnown RBP6.71□□□□□ -1.34
CBX3-207ENST00000481300 AAMPQ13685 434 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 CCDC27Q2M243 656 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 COL13A1Q5TAT6 717 aaPredicted RBP6.71□□□□□ -1.34
CBX3-207ENST00000481300 GDF6Q6KF10 455 aaPredicted RBP6.71□□□□□ -1.34
CBX3-207ENST00000481300 IGF2-ASQ6U949 168 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 ABTB2Q8N961 1025 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 OR13H1Q8NG92 308 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 GPR152Q8TDT2 470 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 PIK3R5Q8WYR1 880 aa6.71□□□□□ -1.34
CBX3-207ENST00000481300 IL22RA1Q8N6P7 574 aa6.7□□□□□ -1.34
CBX3-207ENST00000481300 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
CBX3-207ENST00000481300 MPSTP25325 297 aa6.69□□□□□ -1.34
CBX3-207ENST00000481300 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
CBX3-207ENST00000481300 MEGF10Q96KG7 1140 aa6.69□□□□□ -1.34
CBX3-207ENST00000481300 FAM13BQ9NYF5 915 aa6.69□□□□□ -1.34
CBX3-207ENST00000481300 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CBX3-207ENST00000481300 ATP11AP98196 1134 aa6.68□□□□□ -1.34
CBX3-207ENST00000481300 SETDB1Q15047 1291 aa6.68□□□□□ -1.34
CBX3-207ENST00000481300 NOM1Q5C9Z4 860 aaKnown RBP6.68□□□□□ -1.34
CBX3-207ENST00000481300 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
CBX3-207ENST00000481300 NPR3P17342 541 aa6.67□□□□□ -1.34
CBX3-207ENST00000481300 EIF1AXP47813 144 aaKnown RBP6.67□□□□□ -1.34
CBX3-207ENST00000481300 ADAMTSL4Q6UY14 1074 aa6.67□□□□□ -1.34
CBX3-207ENST00000481300 ATCAYQ86WG3 371 aa6.67□□□□□ -1.34
CBX3-207ENST00000481300 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
CBX3-207ENST00000481300 NDUFB5O43674 189 aa6.66□□□□□ -1.34
CBX3-207ENST00000481300 ALX3O95076 343 aa6.66□□□□□ -1.34
CBX3-207ENST00000481300 CYP2E1P05181 493 aaPredicted RBP6.66□□□□□ -1.34
CBX3-207ENST00000481300 HYAL2Q12891 473 aa6.66□□□□□ -1.34
CBX3-207ENST00000481300 ABI2Q9NYB9 513 aaPredicted RBP6.66□□□□□ -1.34
CBX3-207ENST00000481300 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
CBX3-207ENST00000481300 F8W735 103 aaPredicted RBP6.65□□□□□ -1.34
CBX3-207ENST00000481300 KIF4AO95239 1232 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 MAPK1P28482 360 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 ARHGAP4P98171 946 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 TTC39BQ5VTQ0 682 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms