RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 SALL4Q9UJQ4 1053 aa14.44□□□□□ -0.1
CUL3-209ENST00000481135 UBE2OQ9C0C9 1292 aaKnown RBP14.43□□□□□ -0.1
CUL3-209ENST00000481135 IGFLR1Q9H665 355 aa14.43□□□□□ -0.1
CUL3-209ENST00000481135 AK5Q9Y6K8 562 aa14.43□□□□□ -0.1
CUL3-209ENST00000481135 C2CD2LO14523 706 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 TERTO14746 1132 aaKnown RBP14.42□□□□□ -0.1
CUL3-209ENST00000481135 KIF4AO95239 1232 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 VSIG8P0DPA2 414 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 ARAFP10398 606 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 EIF4BP23588 611 aaKnown RBP14.42□□□□□ -0.1
CUL3-209ENST00000481135 GPLD1P80108 840 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 MRPL58Q14197 206 aaKnown RBP14.42□□□□□ -0.1
CUL3-209ENST00000481135 GAS6Q14393 721 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 TRPM4Q8TD43 1214 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 SRCIN1Q9C0H9 1055 aa14.42□□□□□ -0.1
CUL3-209ENST00000481135 ADH6P28332 368 aa14.41□□□□□ -0.1
CUL3-209ENST00000481135 TBC1D8BQ0IIM8 1120 aa14.41□□□□□ -0.1
CUL3-209ENST00000481135 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
CUL3-209ENST00000481135 IRS1P35568 1242 aa14.4□□□□□ -0.1
CUL3-209ENST00000481135 PCBP4P57723 403 aaKnown RBP14.4□□□□□ -0.1
CUL3-209ENST00000481135 KIAA0319Q5VV43 1072 aa14.4□□□□□ -0.1
CUL3-209ENST00000481135 GPR161Q8N6U8 529 aaKnown RBP14.4□□□□□ -0.1
CUL3-209ENST00000481135 NSUN5Q96P11 429 aaKnown RBP14.4□□□□□ -0.1
CUL3-209ENST00000481135 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
CUL3-209ENST00000481135 TSNAXIP1Q2TAA8 658 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 IRF7Q92985 503 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 EHD4Q9H223 541 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 SUV39H2Q9H5I1 410 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 C12orf49Q9H741 205 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 RNF19AQ9NV58 838 aa14.39□□□□□ -0.11
CUL3-209ENST00000481135 DNAJB12Q9NXW2 375 aaKnown RBP14.39□□□□□ -0.11
CUL3-209ENST00000481135 LOC102724428A0A0B4J2F2 783 aa14.38□□□□□ -0.11
CUL3-209ENST00000481135 SIK1P57059 783 aa14.38□□□□□ -0.11
CUL3-209ENST00000481135 PI16Q6UXB8 463 aa14.38□□□□□ -0.11
CUL3-209ENST00000481135 TNFRSF25Q93038 417 aa14.38□□□□□ -0.11
CUL3-209ENST00000481135 COL25A1Q9BXS0 654 aaPredicted RBP14.38□□□□□ -0.11
CUL3-209ENST00000481135 GHRHP01286 108 aa14.37□□□□□ -0.11
CUL3-209ENST00000481135 A0A1W2PP55 124 aa14.36□□□□□ -0.11
CUL3-209ENST00000481135 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
CUL3-209ENST00000481135 FAM8A1Q9UBU6 413 aa14.36□□□□□ -0.11
CUL3-209ENST00000481135 NFX1Q12986 1120 aaKnown RBP14.35□□□□□ -0.11
CUL3-209ENST00000481135 COL13A1Q5TAT6 717 aaPredicted RBP14.35□□□□□ -0.11
CUL3-209ENST00000481135 OSMRQ99650 979 aa14.35□□□□□ -0.11
CUL3-209ENST00000481135 BACH2Q9BYV9 841 aa14.35□□□□□ -0.11
CUL3-209ENST00000481135 GDF2Q9UK05 429 aaPredicted RBP14.35□□□□□ -0.11
CUL3-209ENST00000481135 IGF1RP08069 1367 aa14.34□□□□□ -0.11
CUL3-209ENST00000481135 RECKO95980 971 aa14.34□□□□□ -0.11
CUL3-209ENST00000481135 MLLT1Q03111 559 aaPredicted RBP14.34□□□□□ -0.11
CUL3-209ENST00000481135 PEAR1Q5VY43 1037 aaPredicted RBP14.34□□□□□ -0.11
CUL3-209ENST00000481135 GOLGA6L1Q8N7Z2 621 aa14.34□□□□□ -0.11
CUL3-209ENST00000481135 CEP120Q8N960 986 aa14.34□□□□□ -0.11
CUL3-209ENST00000481135 LATS2Q9NRM7 1088 aa14.34□□□□□ -0.11
CUL3-209ENST00000481135 ADARB2-AS1A8MUL3 147 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 ZBTB42B2RXF5 422 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 SRSF11Q05519 484 aaKnown RBP14.33□□□□□ -0.12
CUL3-209ENST00000481135 GRM2Q14416 872 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 NXPE4Q6UWF7 544 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 CRELD1Q96HD1 420 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 OSBPL7Q9BZF2 842 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 LIN7BQ9HAP6 207 aa14.33□□□□□ -0.12
CUL3-209ENST00000481135 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
CUL3-209ENST00000481135 NEURL1BA8MQ27 555 aa14.32□□□□□ -0.12
CUL3-209ENST00000481135 EIF2AK2P19525 551 aaKnown RBP14.32□□□□□ -0.12
CUL3-209ENST00000481135 ALAS2P22557 587 aa14.32□□□□□ -0.12
CUL3-209ENST00000481135 HFE2Q6ZVN8 426 aa14.32□□□□□ -0.12
CUL3-209ENST00000481135 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
CUL3-209ENST00000481135 SLC6A14Q9UN76 642 aa14.32□□□□□ -0.12
CUL3-209ENST00000481135 J3QW42 95 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 TCF3P15923 654 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 ADH7P40394 386 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 FAM35AQ86V20 835 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 ZKSCAN3Q9BRR0 538 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 OXCT2Q9BYC2 517 aaPredicted RBP14.31□□□□□ -0.12
CUL3-209ENST00000481135 DZANK1Q9NVP4 752 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 GGA1Q9UJY5 639 aa14.31□□□□□ -0.12
CUL3-209ENST00000481135 SCAMP3O14828 347 aaKnown RBP14.3□□□□□ -0.12
CUL3-209ENST00000481135 GSTT1P30711 240 aa14.3□□□□□ -0.12
CUL3-209ENST00000481135 ZFYVE1Q9HBF4 777 aa14.3□□□□□ -0.12
CUL3-209ENST00000481135 KLF15Q9UIH9 416 aa14.3□□□□□ -0.12
CUL3-209ENST00000481135 ERBB4Q15303 1308 aa14.3□□□□□ -0.12
CUL3-209ENST00000481135 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
CUL3-209ENST00000481135 ELOA3DA6NLF2 546 aaPredicted RBP14.29□□□□□ -0.12
CUL3-209ENST00000481135 SMNDC1O75940 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
CUL3-209ENST00000481135 CPB1P15086 417 aa14.29□□□□□ -0.12
CUL3-209ENST00000481135 ELOA3BQ3SY89 546 aa14.29□□□□□ -0.12
CUL3-209ENST00000481135 RNFT1Q5M7Z0 435 aa14.29□□□□□ -0.12
CUL3-209ENST00000481135 PRPF40BQ6NWY9 871 aaKnown RBP14.29□□□□□ -0.12
CUL3-209ENST00000481135 ELOA3Q8NG57 546 aa14.29□□□□□ -0.12
CUL3-209ENST00000481135 PBX4Q9BYU1 374 aa14.29□□□□□ -0.12
CUL3-209ENST00000481135 USP17L7P0C7H9 530 aa14.28□□□□□ -0.12
CUL3-209ENST00000481135 XRCC5P13010 732 aaKnown RBP14.28□□□□□ -0.12
CUL3-209ENST00000481135 ELMSAN1Q6PJG2 1045 aa14.28□□□□□ -0.12
CUL3-209ENST00000481135 SLCO4C1Q6ZQN7 724 aa14.28□□□□□ -0.12
CUL3-209ENST00000481135 TMEM102Q8N9M5 508 aaPredicted RBP14.28□□□□□ -0.12
CUL3-209ENST00000481135 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
CUL3-209ENST00000481135 CCNJLQ8IV13 435 aa14.27□□□□□ -0.13
CUL3-209ENST00000481135 PDE2AO00408 941 aaPredicted RBP14.26□□□□□ -0.13
CUL3-209ENST00000481135 CNTNAP3BQ96NU0 1288 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms