RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
VPS50-215ENST00000480943 GRIK4Q16099 956 aa9.37□□□□□ -0.91
VPS50-215ENST00000480943 SYNMO15061 1565 aa9.37□□□□□ -0.91
VPS50-215ENST00000480943 KDM5AP29375 1690 aaKnown RBP9.36□□□□□ -0.91
VPS50-215ENST00000480943 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
VPS50-215ENST00000480943 MBTPS1Q14703 1052 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 TSGA10IPQ3SY00 556 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 STRCP1A6NGW2 1772 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS50-215ENST00000480943 E9PCH4 1651 aa9.36□□□□□ -0.91
VPS50-215ENST00000480943 IQGAP3Q86VI3 1631 aa9.35□□□□□ -0.91
VPS50-215ENST00000480943 MAPTP10636 758 aaKnown RBP9.35□□□□□ -0.91
VPS50-215ENST00000480943 CD33P20138 364 aa9.35□□□□□ -0.91
VPS50-215ENST00000480943 USP4Q13107 963 aa9.35□□□□□ -0.91
VPS50-215ENST00000480943 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
VPS50-215ENST00000480943 DNAAF2Q9NVR5 837 aaKnown RBP9.35□□□□□ -0.91
VPS50-215ENST00000480943 ANKRD50Q9ULJ7 1429 aa9.35□□□□□ -0.91
VPS50-215ENST00000480943 IQSEC2Q5JU85 1478 aa9.34□□□□□ -0.91
VPS50-215ENST00000480943 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
VPS50-215ENST00000480943 IL2RAP01589 272 aa9.34□□□□□ -0.91
VPS50-215ENST00000480943 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
VPS50-215ENST00000480943 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
VPS50-215ENST00000480943 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
VPS50-215ENST00000480943 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
VPS50-215ENST00000480943 TAL1P17542 331 aaPredicted RBP9.33□□□□□ -0.92
VPS50-215ENST00000480943 TNP2Q05952 138 aa9.33□□□□□ -0.92
VPS50-215ENST00000480943 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
VPS50-215ENST00000480943 MED14O60244 1454 aa9.33□□□□□ -0.92
VPS50-215ENST00000480943 ADGRB3O60242 1522 aa9.32□□□□□ -0.92
VPS50-215ENST00000480943 SPHKAPQ2M3C7 1700 aa9.32□□□□□ -0.92
VPS50-215ENST00000480943 M0R082 166 aa9.32□□□□□ -0.92
VPS50-215ENST00000480943 ITGAEP38570 1179 aa9.32□□□□□ -0.92
VPS50-215ENST00000480943 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
VPS50-215ENST00000480943 ZNF417Q8TAU3 575 aa9.32□□□□□ -0.92
VPS50-215ENST00000480943 ZNF587Q96SQ5 575 aaPredicted RBP9.32□□□□□ -0.92
VPS50-215ENST00000480943 SLIT1O75093 1534 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 XIRP1Q702N8 1843 aaKnown RBP9.31□□□□□ -0.92
VPS50-215ENST00000480943 DCDC2BA2VCK2 349 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
VPS50-215ENST00000480943 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 ANKLE2Q86XL3 938 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
VPS50-215ENST00000480943 ALG2Q9H553 416 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 HRH3Q9Y5N1 445 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 ROCK1Q13464 1354 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 CPS1P31327 1500 aa9.31□□□□□ -0.92
VPS50-215ENST00000480943 RPRD2Q5VT52 1461 aaKnown RBP9.3□□□□□ -0.92
VPS50-215ENST00000480943 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
VPS50-215ENST00000480943 ARHGAP23Q9P227 1491 aa9.3□□□□□ -0.92
VPS50-215ENST00000480943 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
VPS50-215ENST00000480943 SLC51AQ86UW1 340 aa9.3□□□□□ -0.92
VPS50-215ENST00000480943 LENG1Q96BZ8 264 aaPredicted RBP9.3□□□□□ -0.92
VPS50-215ENST00000480943 NOS1P29475 1434 aa9.3□□□□□ -0.92
VPS50-215ENST00000480943 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
VPS50-215ENST00000480943 TMEM131LA2VDJ0 1609 aa9.29□□□□□ -0.92
VPS50-215ENST00000480943 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
VPS50-215ENST00000480943 SKIP12755 728 aa9.28□□□□□ -0.92
VPS50-215ENST00000480943 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
VPS50-215ENST00000480943 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
VPS50-215ENST00000480943 TRAPPC3LQ5T215 181 aa9.27□□□□□ -0.93
VPS50-215ENST00000480943 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
VPS50-215ENST00000480943 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
VPS50-215ENST00000480943 ETNK1Q9HBU6 452 aa9.27□□□□□ -0.93
VPS50-215ENST00000480943 KIF1BO60333 1816 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 SELPP16109 830 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 EML3Q32P44 896 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
VPS50-215ENST00000480943 MARK1Q9P0L2 795 aa9.26□□□□□ -0.93
VPS50-215ENST00000480943 TMEM2Q9UHN6 1383 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 SIN3BO75182 1162 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 LTKP29376 864 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 RAC1P63000 192 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 IDI1Q13907 227 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
VPS50-215ENST00000480943 CHD2O14647 1828 aaKnown RBP9.25□□□□□ -0.93
VPS50-215ENST00000480943 NUP155O75694 1391 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 UBAP1LF5GYI3 381 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 NID1P14543 1247 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 SCNN1DP51172 638 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 GDF10P55107 478 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 TLR1Q15399 786 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 TXNDC2Q86VQ3 553 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 MDFIQ99750 246 aa9.24□□□□□ -0.93
VPS50-215ENST00000480943 SSBP4Q9BWG4 385 aaPredicted RBP9.24□□□□□ -0.93
VPS50-215ENST00000480943 ALKQ9UM73 1620 aa9.23□□□□□ -0.93
VPS50-215ENST00000480943 LRRC7Q96NW7 1537 aa9.23□□□□□ -0.93
VPS50-215ENST00000480943 LZTS3O60299 673 aaPredicted RBP9.23□□□□□ -0.93
VPS50-215ENST00000480943 JAG1P78504 1218 aa9.23□□□□□ -0.93
VPS50-215ENST00000480943 NCOA4Q13772 614 aa9.23□□□□□ -0.93
VPS50-215ENST00000480943 ARSJQ5FYB0 599 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms