RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
PTPN7-212ENST00000480836 TBC1D10BQ4KMP7 808 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-212ENST00000480836 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
PTPN7-212ENST00000480836 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-212ENST00000480836 ZNF408Q9H9D4 720 aa17.24■□□□□ 0.35
PTPN7-212ENST00000480836 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
PTPN7-212ENST00000480836 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-212ENST00000480836 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-212ENST00000480836 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
PTPN7-212ENST00000480836 DPF2Q92785 391 aa17.23■□□□□ 0.35
PTPN7-212ENST00000480836 CDHR2Q9BYE9 1310 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 H7C1D1 291 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 CDC37L1Q7L3B6 337 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
PTPN7-212ENST00000480836 ADM5C9JUS6 153 aa17.21■□□□□ 0.35
PTPN7-212ENST00000480836 VIL1P09327 827 aaKnown RBP17.21■□□□□ 0.35
PTPN7-212ENST00000480836 GOLGA2Q08379 1002 aa17.21■□□□□ 0.35
PTPN7-212ENST00000480836 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
PTPN7-212ENST00000480836 PDE8AO60658 829 aa17.2■□□□□ 0.34
PTPN7-212ENST00000480836 ECE1P42892 770 aa17.2■□□□□ 0.34
PTPN7-212ENST00000480836 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
PTPN7-212ENST00000480836 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
PTPN7-212ENST00000480836 CWC25Q9NXE8 425 aaPredicted RBP17.2■□□□□ 0.34
PTPN7-212ENST00000480836 UFL1O94874 794 aa17.19■□□□□ 0.34
PTPN7-212ENST00000480836 MAP2K2P36507 400 aa17.19■□□□□ 0.34
PTPN7-212ENST00000480836 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
PTPN7-212ENST00000480836 TTLL11Q8NHH1 800 aa17.19■□□□□ 0.34
PTPN7-212ENST00000480836 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
PTPN7-212ENST00000480836 SCAF8Q9UPN6 1271 aaKnown RBP17.19■□□□□ 0.34
PTPN7-212ENST00000480836 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
PTPN7-212ENST00000480836 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
PTPN7-212ENST00000480836 GMLQ99445 158 aa17.18■□□□□ 0.34
PTPN7-212ENST00000480836 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
PTPN7-212ENST00000480836 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
PTPN7-212ENST00000480836 FAM155AB1AL88 458 aaPredicted RBP17.17■□□□□ 0.34
PTPN7-212ENST00000480836 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 EYA3Q99504 573 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 GREM2Q9H772 168 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
PTPN7-212ENST00000480836 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
PTPN7-212ENST00000480836 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
PTPN7-212ENST00000480836 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
PTPN7-212ENST00000480836 H7C1W4 665 aa17.15■□□□□ 0.34
PTPN7-212ENST00000480836 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
PTPN7-212ENST00000480836 HUNKP57058 714 aa17.15■□□□□ 0.34
PTPN7-212ENST00000480836 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-212ENST00000480836 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
PTPN7-212ENST00000480836 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
PTPN7-212ENST00000480836 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
PTPN7-212ENST00000480836 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
PTPN7-212ENST00000480836 CASP7P55210 303 aa17.14■□□□□ 0.33
PTPN7-212ENST00000480836 CTSWP56202 376 aa17.14■□□□□ 0.33
PTPN7-212ENST00000480836 RSBN1LQ6PCB5 846 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-212ENST00000480836 ANKRD18AQ8IVF6 992 aa17.14■□□□□ 0.33
PTPN7-212ENST00000480836 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-212ENST00000480836 KLRK1P26718 216 aa17.13■□□□□ 0.33
PTPN7-212ENST00000480836 SCARF1Q14162 830 aa17.13■□□□□ 0.33
PTPN7-212ENST00000480836 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
PTPN7-212ENST00000480836 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-212ENST00000480836 GBA2Q9HCG7 927 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-212ENST00000480836 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
PTPN7-212ENST00000480836 CASP8AP2Q9UKL3 1982 aa17.13■□□□□ 0.33
PTPN7-212ENST00000480836 SNAP23O00161 211 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 ANGEL2Q5VTE6 544 aaKnown RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 RGMBQ6NW40 437 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 MOB2Q70IA6 237 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 DCPSQ96C86 337 aaKnown RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 XDHP47989 1333 aa17.12■□□□□ 0.33
PTPN7-212ENST00000480836 ZNF646O15015 1829 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-212ENST00000480836 VAMP4O75379 141 aa17.11■□□□□ 0.33
PTPN7-212ENST00000480836 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
PTPN7-212ENST00000480836 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-212ENST00000480836 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
PTPN7-212ENST00000480836 BEGAINQ9BUH8 593 aa17.11■□□□□ 0.33
PTPN7-212ENST00000480836 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-212ENST00000480836 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 GCKRQ14397 625 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 NBPF9Q3BBW0 867 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 AGBL3Q8NEM8 1001 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 PSME4Q14997 1843 aa17.1■□□□□ 0.33
PTPN7-212ENST00000480836 G3V3G9 751 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
PTPN7-212ENST00000480836 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 MCOLN1Q9GZU1 580 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 MYOZ2Q9NPC6 264 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
PTPN7-212ENST00000480836 ZNF609O15014 1411 aa17.08■□□□□ 0.32
PTPN7-212ENST00000480836 USP17L3A6NCW0 530 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms