RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 UFL1O94874 794 aa19.58■□□□□ 0.72
LIMS3-203ENST00000480744 NEXNQ0ZGT2 675 aa19.58■□□□□ 0.72
LIMS3-203ENST00000480744 GRM1Q13255 1194 aa19.58■□□□□ 0.72
LIMS3-203ENST00000480744 MICALL2Q8IY33 904 aa19.58■□□□□ 0.72
LIMS3-203ENST00000480744 TRPM4Q8TD43 1214 aa19.58■□□□□ 0.72
LIMS3-203ENST00000480744 GLIS2Q9BZE0 524 aaPredicted RBP19.58■□□□□ 0.72
LIMS3-203ENST00000480744 POLR2AP24928 1970 aaKnown RBP19.57■□□□□ 0.72
LIMS3-203ENST00000480744 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
LIMS3-203ENST00000480744 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
LIMS3-203ENST00000480744 G3V3G9 751 aa19.57■□□□□ 0.72
LIMS3-203ENST00000480744 DCAF8Q5TAQ9 597 aa19.57■□□□□ 0.72
LIMS3-203ENST00000480744 ZC3H12CQ9C0D7 883 aaKnown RBP19.57■□□□□ 0.72
LIMS3-203ENST00000480744 IGKV5-2P06315 115 aa19.56■□□□□ 0.72
LIMS3-203ENST00000480744 HIRAP54198 1017 aaPredicted RBP19.56■□□□□ 0.72
LIMS3-203ENST00000480744 CST9Q5W186 159 aa19.56■□□□□ 0.72
LIMS3-203ENST00000480744 G2E3Q7L622 706 aa19.56■□□□□ 0.72
LIMS3-203ENST00000480744 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
LIMS3-203ENST00000480744 GGA1Q9UJY5 639 aa19.56■□□□□ 0.72
LIMS3-203ENST00000480744 IL16Q14005 1332 aa19.55■□□□□ 0.72
LIMS3-203ENST00000480744 CELF2O95319 508 aaKnown RBP19.55■□□□□ 0.72
LIMS3-203ENST00000480744 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
LIMS3-203ENST00000480744 CWF19L2Q2TBE0 894 aaKnown RBP19.55■□□□□ 0.72
LIMS3-203ENST00000480744 ZNF408Q9H9D4 720 aa19.55■□□□□ 0.72
LIMS3-203ENST00000480744 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
LIMS3-203ENST00000480744 PODXL2Q9NZ53 605 aa19.55■□□□□ 0.72
LIMS3-203ENST00000480744 PSME4Q14997 1843 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
LIMS3-203ENST00000480744 CTSWP56202 376 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 CYP4F22Q6NT55 531 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 SAMD7Q7Z3H4 446 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 ZC3H15Q8WU90 426 aaKnown RBP19.54■□□□□ 0.72
LIMS3-203ENST00000480744 DPF2Q92785 391 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 CAPNS2Q96L46 248 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 WBP1LQ9NX94 342 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 RTL9Q8NET4 1388 aa19.54■□□□□ 0.72
LIMS3-203ENST00000480744 FANCIQ9NVI1 1328 aa19.53■□□□□ 0.72
LIMS3-203ENST00000480744 ECE1P42892 770 aa19.53■□□□□ 0.72
LIMS3-203ENST00000480744 TBC1D10BQ4KMP7 808 aaPredicted RBP19.53■□□□□ 0.72
LIMS3-203ENST00000480744 RBM26Q5T8P6 1007 aaKnown RBP19.53■□□□□ 0.72
LIMS3-203ENST00000480744 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
LIMS3-203ENST00000480744 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
LIMS3-203ENST00000480744 TLL2Q9Y6L7 1015 aa19.53■□□□□ 0.72
LIMS3-203ENST00000480744 XDHP47989 1333 aa19.52■□□□□ 0.72
LIMS3-203ENST00000480744 THSD7BQ9C0I4 1608 aa19.52■□□□□ 0.72
LIMS3-203ENST00000480744 NEURL1BA8MQ27 555 aa19.52■□□□□ 0.72
LIMS3-203ENST00000480744 RPS12P25398 132 aaKnown RBP19.52■□□□□ 0.72
LIMS3-203ENST00000480744 CDC37L1Q7L3B6 337 aa19.52■□□□□ 0.72
LIMS3-203ENST00000480744 UBE3BQ7Z3V4 1068 aa19.52■□□□□ 0.72
LIMS3-203ENST00000480744 MAP2K1Q02750 393 aaPredicted RBP19.51■□□□□ 0.71
LIMS3-203ENST00000480744 FLIIQ13045 1269 aa19.51■□□□□ 0.71
LIMS3-203ENST00000480744 FKBP5Q13451 457 aaPredicted RBP19.51■□□□□ 0.71
LIMS3-203ENST00000480744 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
LIMS3-203ENST00000480744 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
LIMS3-203ENST00000480744 GREM2Q9H772 168 aa19.51■□□□□ 0.71
LIMS3-203ENST00000480744 EGFRP00533 1210 aa19.5■□□□□ 0.71
LIMS3-203ENST00000480744 LBX1P52954 281 aa19.5■□□□□ 0.71
LIMS3-203ENST00000480744 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
LIMS3-203ENST00000480744 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
LIMS3-203ENST00000480744 ATP2B4P23634 1241 aa19.49■□□□□ 0.71
LIMS3-203ENST00000480744 EXOSC9Q06265 439 aaKnown RBP19.49■□□□□ 0.71
LIMS3-203ENST00000480744 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
LIMS3-203ENST00000480744 H7C1W4 665 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 VIL1P09327 827 aaKnown RBP19.48■□□□□ 0.71
LIMS3-203ENST00000480744 KIF4BQ2VIQ3 1234 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 DLK2Q6UY11 383 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 SAPCD2Q86UD0 394 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 DNAAF4Q8WXU2 420 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
LIMS3-203ENST00000480744 AOC2O75106 756 aa19.47■□□□□ 0.71
LIMS3-203ENST00000480744 GCKRQ14397 625 aa19.47■□□□□ 0.71
LIMS3-203ENST00000480744 KRT26Q7Z3Y9 468 aa19.47■□□□□ 0.71
LIMS3-203ENST00000480744 DCPSQ96C86 337 aaKnown RBP19.47■□□□□ 0.71
LIMS3-203ENST00000480744 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
LIMS3-203ENST00000480744 VAMP4O75379 141 aa19.46■□□□□ 0.71
LIMS3-203ENST00000480744 HSPA8P11142 646 aaKnown RBP19.46■□□□□ 0.71
LIMS3-203ENST00000480744 IGHMBP2P38935 993 aaKnown RBP19.46■□□□□ 0.71
LIMS3-203ENST00000480744 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
LIMS3-203ENST00000480744 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
LIMS3-203ENST00000480744 WTIPA6NIX2 430 aaPredicted RBP19.45■□□□□ 0.7
LIMS3-203ENST00000480744 ADM5C9JUS6 153 aa19.45■□□□□ 0.7
LIMS3-203ENST00000480744 RSBN1LQ6PCB5 846 aaPredicted RBP19.45■□□□□ 0.7
LIMS3-203ENST00000480744 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
LIMS3-203ENST00000480744 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
LIMS3-203ENST00000480744 AGBL3Q8NEM8 1001 aa19.44■□□□□ 0.7
LIMS3-203ENST00000480744 GGA3Q9NZ52 723 aa19.44■□□□□ 0.7
LIMS3-203ENST00000480744 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
LIMS3-203ENST00000480744 USP17L3A6NCW0 530 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 USP17L4A6NCW7 530 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 ITGA6P23229 1130 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 MAP2K2P36507 400 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 CCT4P50991 539 aaKnown RBP19.43■□□□□ 0.7
LIMS3-203ENST00000480744 HUNKP57058 714 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 PODNQ7Z5L7 613 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 FBXW7Q969H0 707 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 PLA2G12BQ9BX93 195 aa19.43■□□□□ 0.7
LIMS3-203ENST00000480744 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
LIMS3-203ENST00000480744 ASTN2O75129 1339 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms