RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
CNKSR1-205ENST00000480617 GMLQ99445 158 aa9.8□□□□□ -0.84
CNKSR1-205ENST00000480617 GGA3Q9NZ52 723 aa9.8□□□□□ -0.84
CNKSR1-205ENST00000480617 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
CNKSR1-205ENST00000480617 HTTP42858 3142 aa9.8□□□□□ -0.84
CNKSR1-205ENST00000480617 A0A0C4DFX4 3053 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 ECE2O60344 883 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 U2AF1L5P0DN76 240 aaPredicted RBP9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 GPSM2P81274 684 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 U2AF1Q01081 240 aaKnown RBP eCLIP9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 TCIRG1Q13488 830 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 ANGEL2Q5VTE6 544 aaKnown RBP9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 AGBL3Q8NEM8 1001 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 PITPNM2Q9BZ72 1349 aa9.79□□□□□ -0.84
CNKSR1-205ENST00000480617 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 TBC1D16Q8TBP0 767 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 CELF1Q92879 486 aaKnown RBP9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 CFAP53Q96M91 514 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 EYA3Q99504 573 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 THUMPD2Q9BTF0 503 aaKnown RBP9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 ZNF609O15014 1411 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 KIAA0100Q14667 2235 aaKnown RBP9.78□□□□□ -0.84
CNKSR1-205ENST00000480617 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 INHBEP58166 350 aa9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 ANKRD36CQ5JPF3 1778 aa9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 CEP290O15078 2479 aa9.77□□□□□ -0.85
CNKSR1-205ENST00000480617 CENPFP49454 3210 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 EN2P19622 333 aaPredicted RBP9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 RPS8P62241 208 aaKnown RBP9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 SREBF2Q12772 1141 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 PROSER3Q2NL68 480 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 COPS6Q7L5N1 327 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 OTOP1Q7RTM1 612 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 ARMC5Q96C12 935 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 MYOZ2Q9NPC6 264 aa9.76□□□□□ -0.85
CNKSR1-205ENST00000480617 USP17L8P0C7I0 530 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 PTPN12Q05209 780 aaKnown RBP9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 PRAMEF18Q5VWM3 479 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 PLEKHF1Q96S99 279 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 PTPN22Q9Y2R2 807 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 LRRC37AA6NMS7 1700 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 TRIOBPQ9H2D6 2365 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
CNKSR1-205ENST00000480617 BRCA2P51587 3418 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 TRIM28Q13263 835 aaKnown RBP9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 NBPF9Q3BBW0 867 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 SPRYD7Q5W111 196 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 ISCA1Q9BUE6 129 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 TRIM17Q9Y577 477 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 TAF1P21675 1872 aa9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 RANBP2P49792 3224 aaKnown RBP9.74□□□□□ -0.85
CNKSR1-205ENST00000480617 DLL1O00548 723 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 ANXA1P04083 346 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 PODNQ7Z5L7 613 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 IFNL1Q8IU54 200 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 XAGE3Q8WTP9 111 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 FAM89AQ96GI7 184 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 BABAM1Q9NWV8 329 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 SCAF8Q9UPN6 1271 aaKnown RBP9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 LAMB2P55268 1798 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
CNKSR1-205ENST00000480617 SCN9AQ15858 1988 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 MANSC4A6NHS7 340 aaPredicted RBP9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 WNT10BO00744 389 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 MMP14P50281 582 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
CNKSR1-205ENST00000480617 UNCXA6NJT0 531 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 NF2P35240 595 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 CAP1Q01518 475 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 AIMP1Q12904 312 aaKnown RBP9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 NFE2L2Q16236 605 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 MAP3K11Q16584 847 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 ARMC9Q7Z3E5 817 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 ERO1AQ96HE7 468 aa9.71□□□□□ -0.86
CNKSR1-205ENST00000480617 G3V3G9 751 aa9.7□□□□□ -0.86
CNKSR1-205ENST00000480617 H0YGN5 161 aa9.7□□□□□ -0.86
CNKSR1-205ENST00000480617 IGF2BP3O00425 579 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms