RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 NAP1L3Q99457 506 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-212ENST00000480614 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 GJB2P29033 226 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 UBASH3AP57075 661 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 SNX16P57768 344 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 FLIIQ13045 1269 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
VEGFA-212ENST00000480614 GOLGA1Q92805 767 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-212ENST00000480614 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 NAIPQ13075 1403 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-212ENST00000480614 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 ATP5DP30049 168 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 STIM2Q9P246 746 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 SEPT6Q14141 434 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 MTRF1LQ9UGC7 380 aaKnown RBP10.82□□□□□ -0.68
VEGFA-212ENST00000480614 KIF1BO60333 1816 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 GTF2F1P35269 517 aaKnown RBP eCLIP10.82□□□□□ -0.683e-11■■■■■ 42.3
VEGFA-212ENST00000480614 CCDC121Q6ZUS5 278 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 ARFGAP2Q8N6H7 521 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 TXNDC16Q9P2K2 825 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 NAP1L4Q99733 375 aaKnown RBP10.82□□□□□ -0.68
VEGFA-212ENST00000480614 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 NBPF5PQ86XG9 351 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-212ENST00000480614 CPLX3Q8WVH0 158 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
VEGFA-212ENST00000480614 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
VEGFA-212ENST00000480614 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 ASIC1P78348 528 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 MAP3K2Q9Y2U5 619 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 ARL1P40616 181 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 NDC80O14777 642 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 LIG1P18858 919 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 BIN1O00499 593 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 RGS22Q8NE09 1264 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 ARHGEF11O15085 1522 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 KRT86O43790 486 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 TTC22Q5TAA0 569 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 FAM184BQ9ULE4 1060 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 XPCQ01831 940 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 KIF5AQ12840 1032 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-212ENST00000480614 RRAGBQ5VZM2 374 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 GSTA5Q7RTV2 222 aa10.81□□□□□ -0.68
VEGFA-212ENST00000480614 SNRPA1P09661 255 aaKnown RBP10.8□□□□□ -0.68
VEGFA-212ENST00000480614 GUCY1B3Q02153 619 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 NEK11Q8NG66 645 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 MRVI1Q9Y6F6 885 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 EXOC5O00471 708 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
VEGFA-212ENST00000480614 HS2ST1Q7LGA3 356 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 MRPS27Q92552 414 aaKnown RBP10.8□□□□□ -0.68
VEGFA-212ENST00000480614 MIS18AQ9NYP9 233 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 SSFA2P28290 1259 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 GNA11P29992 359 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 ZNF804AQ7Z570 1209 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 TBC1D9Q6ZT07 1266 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 EEF2P13639 858 aaKnown RBP10.8□□□□□ -0.68
VEGFA-212ENST00000480614 HAUS2Q9NVX0 235 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 FAM200AQ8TCP9 573 aa10.8□□□□□ -0.68
VEGFA-212ENST00000480614 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 ZSCAN22P10073 491 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 RPL13P26373 211 aaKnown RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 VAV2P52735 878 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 CIB2O75838 187 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 PAIP2Q9BPZ3 127 aaKnown RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 A6NNZ2 444 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 TUBB8Q3ZCM7 444 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 FAM13AO94988 1023 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 MAK16Q9BXY0 300 aaKnown RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 IFNL2Q8IZJ0 200 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 AFAP1L2Q8N4X5 818 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 NAPAP54920 295 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 CFAP157Q5JU67 520 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 CFAP58Q5T655 872 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 PUS7Q96PZ0 661 aaKnown RBP10.79□□□□□ -0.68
VEGFA-212ENST00000480614 MTUS1Q9ULD2 1270 aa10.79□□□□□ -0.68
VEGFA-212ENST00000480614 RFC4P35249 363 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms