RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 JRKLQ9Y4A0 524 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 TMEM131LA2VDJ0 1609 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 CCDC151A5D8V7 595 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 SLC27A2O14975 620 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
SIK3-210ENST00000480468 SMC2O95347 1197 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
SIK3-210ENST00000480468 LMAN1P49257 510 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 TOB2Q14106 344 aaPredicted RBP12.38□□□□□ -0.43
SIK3-210ENST00000480468 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
SIK3-210ENST00000480468 BRD3Q15059 726 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 C3P01024 1663 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 ZSCAN12O43309 604 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 GGT6Q6P531 493 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
SIK3-210ENST00000480468 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
SIK3-210ENST00000480468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
SIK3-210ENST00000480468 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 SOX12O15370 315 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
SIK3-210ENST00000480468 GYS2P54840 703 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 NAA16Q6N069 864 aaPredicted RBP12.37□□□□□ -0.43
SIK3-210ENST00000480468 HNRNPLLQ8WVV9 542 aaKnown RBP12.37□□□□□ -0.43
SIK3-210ENST00000480468 BRF1Q92994 677 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 CPS1P31327 1500 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 JCADQ9P266 1359 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
SIK3-210ENST00000480468 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 H3BQV1 296 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 FANCGO15287 622 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
SIK3-210ENST00000480468 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 PARD6BQ9BYG5 372 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 LRRC37A3O60309 1634 aa12.36□□□□□ -0.43
SIK3-210ENST00000480468 H3BQF6 201 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 CPP00450 1065 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 PSEN1P49768 467 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 LONRF2Q1L5Z9 754 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 SECISBP2LQ93073 1101 aaKnown RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 SYTL4Q96C24 671 aaPredicted RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 SRGAP3O43295 1099 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 CORO7P57737 925 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 PPP2R3AQ06190 1150 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 AXDND1Q5T1B0 1012 aaPredicted RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 ZNF396Q96N95 335 aaPredicted RBP12.35□□□□□ -0.43
SIK3-210ENST00000480468 MIS18AQ9NYP9 233 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 ABCC6O95255 1503 aa12.35□□□□□ -0.43
SIK3-210ENST00000480468 AKAP12Q02952 1782 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
SIK3-210ENST00000480468 IKBKBO14920 756 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 TXLNAP40222 546 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 APOBRQ0VD83 1088 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 KRT32Q14532 448 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 FMR1NBQ8N0W7 255 aaPredicted RBP12.34□□□□□ -0.43
SIK3-210ENST00000480468 FSIP1Q8NA03 581 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 ZBTB9Q96C00 473 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
SIK3-210ENST00000480468 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 JAK2O60674 1132 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 TUBB4BP68371 445 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
SIK3-210ENST00000480468 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
SIK3-210ENST00000480468 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
SIK3-210ENST00000480468 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 CBFA2T2O43439 604 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 MYO1BO43795 1136 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 IFIT2P09913 472 aaKnown RBP12.33□□□□□ -0.44
SIK3-210ENST00000480468 USP5P45974 858 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 NCAPHQ15003 741 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
SIK3-210ENST00000480468 MRPS27Q92552 414 aaKnown RBP12.33□□□□□ -0.44
SIK3-210ENST00000480468 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 EIF3JO75822 258 aaKnown RBP12.33□□□□□ -0.44
SIK3-210ENST00000480468 MTX1Q13505 466 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms