RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 OTUD7AQ8TE49 926 aaPredicted RBP12.85□□□□□ -0.35
LINC00173-203ENST00000480237 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00173-203ENST00000480237 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
LINC00173-203ENST00000480237 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 ZPR1O75312 459 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 KLHDC4Q8TBB5 520 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
LINC00173-203ENST00000480237 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
LINC00173-203ENST00000480237 PHF14O94880 888 aa12.83□□□□□ -0.36
LINC00173-203ENST00000480237 MX1P20591 662 aa12.83□□□□□ -0.36
LINC00173-203ENST00000480237 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
LINC00173-203ENST00000480237 RFX5P48382 616 aaPredicted RBP12.83□□□□□ -0.36
LINC00173-203ENST00000480237 COPRSQ9NQ92 184 aa12.83□□□□□ -0.36
LINC00173-203ENST00000480237 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
LINC00173-203ENST00000480237 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
LINC00173-203ENST00000480237 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
LINC00173-203ENST00000480237 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
LINC00173-203ENST00000480237 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
LINC00173-203ENST00000480237 CLASRPQ8N2M8 674 aaKnown RBP12.82□□□□□ -0.36
LINC00173-203ENST00000480237 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
LINC00173-203ENST00000480237 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
LINC00173-203ENST00000480237 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
LINC00173-203ENST00000480237 PDE8AO60658 829 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 APBA3O96018 575 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 RFC4P35249 363 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 PDE1AP54750 535 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 CTSWP56202 376 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 TXNRD1Q16881 649 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 SYNE4Q8N205 404 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 AOX1Q06278 1338 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 SALL3Q9BXA9 1300 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
LINC00173-203ENST00000480237 NTSR2O95665 410 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
LINC00173-203ENST00000480237 GSPT1P15170 499 aaKnown RBP12.81□□□□□ -0.36
LINC00173-203ENST00000480237 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 TRAPPC3LQ5T215 181 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 GPATCH3Q96I76 525 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
LINC00173-203ENST00000480237 ZNF609O15014 1411 aa12.81□□□□□ -0.36
LINC00173-203ENST00000480237 COL4A1P02462 1669 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 PLSCR1O15162 318 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 SASH1O94885 1247 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
LINC00173-203ENST00000480237 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
LINC00173-203ENST00000480237 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 AACSQ86V21 672 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 AMIGO3Q86WK7 504 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
LINC00173-203ENST00000480237 OSBPL3Q9H4L5 887 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
LINC00173-203ENST00000480237 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
LINC00173-203ENST00000480237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
LINC00173-203ENST00000480237 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
LINC00173-203ENST00000480237 ZNF594Q96JF6 807 aaPredicted RBP12.79□□□□□ -0.36
LINC00173-203ENST00000480237 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
LINC00173-203ENST00000480237 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
LINC00173-203ENST00000480237 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 CDC45O75419 566 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 CSF1RP07333 972 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
LINC00173-203ENST00000480237 SSFA2P28290 1259 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 LHX8Q68G74 356 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 GREM2Q9H772 168 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 ABCC12Q96J65 1359 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
LINC00173-203ENST00000480237 EYA2O00167 538 aa12.77□□□□□ -0.36
LINC00173-203ENST00000480237 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.36
LINC00173-203ENST00000480237 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.36
LINC00173-203ENST00000480237 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.36
LINC00173-203ENST00000480237 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.36
LINC00173-203ENST00000480237 RTL9Q8NET4 1388 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 NPHP1O15259 732 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 CIAO1O76071 339 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 ITGA6P23229 1130 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 TFCP2Q12800 502 aa12.77□□□□□ -0.37
LINC00173-203ENST00000480237 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.37
LINC00173-203ENST00000480237 ERC2O15083 957 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 SDSP20132 328 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
LINC00173-203ENST00000480237 ERFEQ4G0M1 354 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 LRRC24Q50LG9 513 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms