RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
SCAMP3-207ENST00000480219 SOCS7O14512 581 aa20.76■□□□□ 0.91
SCAMP3-207ENST00000480219 TFCP2Q12800 502 aa20.76■□□□□ 0.91
SCAMP3-207ENST00000480219 CLASRPQ8N2M8 674 aaKnown RBP20.76■□□□□ 0.91
SCAMP3-207ENST00000480219 ZNF609O15014 1411 aa20.76■□□□□ 0.91
SCAMP3-207ENST00000480219 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
SCAMP3-207ENST00000480219 OSBPL3Q9H4L5 887 aa20.75■□□□□ 0.91
SCAMP3-207ENST00000480219 CEP126Q9P2H0 1117 aa20.75■□□□□ 0.91
SCAMP3-207ENST00000480219 ZBTB47Q9UFB7 747 aaPredicted RBP20.75■□□□□ 0.91
SCAMP3-207ENST00000480219 H0YIN7 160 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 APBB1O00213 710 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 PDE8BO95263 885 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 TGFB2P61812 414 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 TNNI3KQ59H18 835 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 C2CD5Q86YS7 1000 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 EAF2Q96CJ1 260 aaPredicted RBP20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 IL1RAPL2Q9NP60 686 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 STAP2Q9UGK3 403 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 MINPP1Q9UNW1 487 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 FPGT-TNNI3KV9GXZ4 949 aa20.74■□□□□ 0.91
SCAMP3-207ENST00000480219 ARAP2Q8WZ64 1704 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 FGFR2P21802 821 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 METTL24Q5JXM2 366 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 SPON1Q9HCB6 807 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 AKAP2Q9Y2D5 859 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
SCAMP3-207ENST00000480219 CHRNDQ07001 517 aa20.72■□□□□ 0.91
SCAMP3-207ENST00000480219 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
SCAMP3-207ENST00000480219 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
SCAMP3-207ENST00000480219 LTBP1Q14766 1721 aa20.72■□□□□ 0.91
SCAMP3-207ENST00000480219 AOX1Q06278 1338 aa20.72■□□□□ 0.91
SCAMP3-207ENST00000480219 KCNA3P22001 575 aa20.71■□□□□ 0.91
SCAMP3-207ENST00000480219 CNKSR1Q969H4 720 aa20.71■□□□□ 0.91
SCAMP3-207ENST00000480219 ANKRD2Q9GZV1 360 aa20.71■□□□□ 0.91
SCAMP3-207ENST00000480219 PUM3Q15397 648 aaKnown RBP20.7■□□□□ 0.9
SCAMP3-207ENST00000480219 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
SCAMP3-207ENST00000480219 SP8Q8IXZ3 490 aa20.7■□□□□ 0.9
SCAMP3-207ENST00000480219 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
SCAMP3-207ENST00000480219 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
SCAMP3-207ENST00000480219 A0A1B0GUL7 405 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 ZBTB22O15209 634 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 CHRNA5P30532 468 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 PDE1AP54750 535 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 UBE4AQ14139 1066 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 AACSQ86V21 672 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 LPIN2Q92539 896 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 TTC41PQ6P2S7 1318 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
SCAMP3-207ENST00000480219 PPEF1O14829 653 aaPredicted RBP20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 MX1P20591 662 aa20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 ATP2B3Q16720 1220 aa20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 DBNLQ9UJU6 430 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 BRCA1P38398 1863 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-207ENST00000480219 IRS2Q9Y4H2 1338 aa20.67■□□□□ 0.9
SCAMP3-207ENST00000480219 DPEP1P16444 411 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 TIMM10P62072 90 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 C15orf52Q6ZUT6 534 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 PI4K2BQ8TCG2 481 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 CCDC8Q9H0W5 538 aaPredicted RBP20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 TLR7Q9NYK1 1049 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 LEMD3Q9Y2U8 911 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 XDHP47989 1333 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 SLX4Q8IY92 1834 aa20.66■□□□□ 0.9
SCAMP3-207ENST00000480219 RGS3P49796 1198 aa20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 ZNF512BQ96KM6 892 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
SCAMP3-207ENST00000480219 DUOX1Q9NRD9 1551 aa20.64■□□□□ 0.9
SCAMP3-207ENST00000480219 TAF5LO75529 589 aa20.64■□□□□ 0.89
SCAMP3-207ENST00000480219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.64■□□□□ 0.89
SCAMP3-207ENST00000480219 XAGE2Q96GT9 111 aa20.64■□□□□ 0.89
SCAMP3-207ENST00000480219 GPATCH3Q96I76 525 aa20.64■□□□□ 0.89
SCAMP3-207ENST00000480219 IFIT1P09914 478 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 SLC5A1P13866 664 aa20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 ATP5JP18859 108 aa20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 GRIPAP1Q4V328 841 aa20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 TTLL6Q8N841 843 aa20.63■□□□□ 0.89
SCAMP3-207ENST00000480219 ZNF804BA4D1E1 1349 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 GLRX3O76003 335 aaKnown RBP20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 ATP2B4P23634 1241 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 GPSM2P81274 684 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 TTC22Q5TAA0 569 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 SLC51AQ86UW1 340 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 CACNA1SQ13698 1873 aa20.62■□□□□ 0.89
SCAMP3-207ENST00000480219 SNAP23O00161 211 aa20.61■□□□□ 0.89
SCAMP3-207ENST00000480219 ERC2O15083 957 aa20.61■□□□□ 0.89
SCAMP3-207ENST00000480219 ADORA1P30542 326 aa20.61■□□□□ 0.89
SCAMP3-207ENST00000480219 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
SCAMP3-207ENST00000480219 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms