RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 KIF4BQ2VIQ3 1234 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 ISCA1Q9BUE6 129 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 ASTN2O75129 1339 aaPredicted RBP9.19□□□□□ -0.94
COL17A1-205ENST00000480127 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
COL17A1-205ENST00000480127 VIL1P09327 827 aaKnown RBP9.18□□□□□ -0.94
COL17A1-205ENST00000480127 CALD1Q05682 793 aaKnown RBP9.18□□□□□ -0.94
COL17A1-205ENST00000480127 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 CTU1Q7Z7A3 348 aaKnown RBP9.18□□□□□ -0.94
COL17A1-205ENST00000480127 TBC1D16Q8TBP0 767 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 CDCA5Q96FF9 252 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 FAM89AQ96GI7 184 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 GGA3Q9NZ52 723 aa9.18□□□□□ -0.94
COL17A1-205ENST00000480127 ATP5J2-PTCD1G3V325 749 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 RASAL3Q86YV0 1011 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 PLBD2Q8NHP8 589 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 EYA3Q99504 573 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
COL17A1-205ENST00000480127 POLR2AP24928 1970 aaKnown RBP9.17□□□□□ -0.94
COL17A1-205ENST00000480127 CHL1O00533 1208 aa9.16□□□□□ -0.94
COL17A1-205ENST00000480127 ZNF280AP59817 542 aaPredicted RBP9.16□□□□□ -0.94
COL17A1-205ENST00000480127 RPS8P62241 208 aaKnown RBP9.16□□□□□ -0.94
COL17A1-205ENST00000480127 ANGEL2Q5VTE6 544 aaKnown RBP9.16□□□□□ -0.94
COL17A1-205ENST00000480127 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
COL17A1-205ENST00000480127 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
COL17A1-205ENST00000480127 REM2Q8IYK8 340 aaPredicted RBP9.16□□□□□ -0.94
COL17A1-205ENST00000480127 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
COL17A1-205ENST00000480127 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
COL17A1-205ENST00000480127 SCN9AQ15858 1988 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 ZNF609O15014 1411 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 G3V3G9 751 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 IRS4O14654 1257 aaPredicted RBP9.15□□□□□ -0.94
COL17A1-205ENST00000480127 GOLGA2Q08379 1002 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
COL17A1-205ENST00000480127 SCARF1Q14162 830 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
COL17A1-205ENST00000480127 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 GMLQ99445 158 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 CHMP4AQ9BY43 222 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
COL17A1-205ENST00000480127 SEC31BQ9NQW1 1179 aa9.15□□□□□ -0.94
COL17A1-205ENST00000480127 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.95
COL17A1-205ENST00000480127 AKAP11Q9UKA4 1901 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 UFL1O94874 794 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 FKBP1BP68106 108 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 RSBN1LQ6PCB5 846 aaPredicted RBP9.14□□□□□ -0.95
COL17A1-205ENST00000480127 MOB2Q70IA6 237 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 RIC3Q7Z5B4 369 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
COL17A1-205ENST00000480127 DBF4Q9UBU7 674 aaPredicted RBP9.14□□□□□ -0.95
COL17A1-205ENST00000480127 ADAMTS8Q9UP79 889 aa9.14□□□□□ -0.95
COL17A1-205ENST00000480127 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
COL17A1-205ENST00000480127 PITPNM2Q9BZ72 1349 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 UBE2Q2LH0YL09 131 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
COL17A1-205ENST00000480127 TBC1D8O95759 1140 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 HOXB7P09629 217 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
COL17A1-205ENST00000480127 PKN2Q16513 984 aaKnown RBP9.13□□□□□ -0.95
COL17A1-205ENST00000480127 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 GGA1Q9UJY5 639 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
COL17A1-205ENST00000480127 GPR25O00155 361 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 APAF1O14727 1248 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 DDX58O95786 925 aaKnown RBP9.12□□□□□ -0.95
COL17A1-205ENST00000480127 USP17L8P0C7I0 530 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 ZEB1P37275 1124 aaPredicted RBP9.12□□□□□ -0.95
COL17A1-205ENST00000480127 TM4SF4P48230 202 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 GNAI1P63096 354 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
COL17A1-205ENST00000480127 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 ZBTB38Q8NAP3 1195 aaPredicted RBP9.12□□□□□ -0.95
COL17A1-205ENST00000480127 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 HDAC9Q9UKV0 1011 aa9.12□□□□□ -0.95
COL17A1-205ENST00000480127 WTIPA6NIX2 430 aaPredicted RBP9.11□□□□□ -0.95
COL17A1-205ENST00000480127 ANP32CO43423 234 aa9.11□□□□□ -0.95
COL17A1-205ENST00000480127 NBPF9Q3BBW0 867 aa9.11□□□□□ -0.95
COL17A1-205ENST00000480127 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
COL17A1-205ENST00000480127 PRKRIP1Q9H875 184 aaPredicted RBP9.11□□□□□ -0.95
COL17A1-205ENST00000480127 PSME4Q14997 1843 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 USP17L3A6NCW0 530 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 USP17L4A6NCW7 530 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 PCCAP05165 728 aaPredicted RBP9.1□□□□□ -0.95
COL17A1-205ENST00000480127 NEXNQ0ZGT2 675 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 FBXO46Q6PJ61 603 aaPredicted RBP9.1□□□□□ -0.95
COL17A1-205ENST00000480127 USP17L1Q7RTZ2 530 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 JARID2Q92833 1246 aaPredicted RBP9.1□□□□□ -0.95
COL17A1-205ENST00000480127 CCDC85AQ96PX6 553 aaPredicted RBP9.1□□□□□ -0.95
COL17A1-205ENST00000480127 MXD3Q9BW11 206 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 R3HDMLQ9H3Y0 253 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 PHAXQ9H814 394 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms