RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SIL1Q9H173 461 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 MRC2Q9UBG0 1479 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 SSR1P43307 286 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 PROSER2Q86WR7 435 aaPredicted RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 RSRC1Q96IZ7 334 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 GLT8D2Q9H1C3 349 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 TMOD2Q9NZR1 351 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7□□□□□ -1.29
PRPF4B-205ENST00000480058 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 TTC31Q49AM3 519 aaPredicted RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 KSR2Q6VAB6 950 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 TRIM47Q96LD4 638 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 JADE2Q9NQC1 790 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 PRDM11Q9NQV5 511 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 NUP58Q9BVL2 599 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 KIAA1524Q8TCG1 905 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 CHMLP26374 656 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 ATP5DP30049 168 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 MCM6Q14566 821 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 ATRIPQ8WXE1 791 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 CLSTN2Q9H4D0 955 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 MED4Q9NPJ6 270 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 ANKRD62A6NC57 917 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 RAD21O60216 631 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 ETF1P62495 437 aaKnown RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 MAATS1Q7Z4T9 603 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 TSGA10Q9BZW7 698 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 ZHX3Q9H4I2 956 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 BAG3O95817 575 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 NLRP5P59047 1200 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 IRX3P78415 501 aaPredicted RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 TMED8Q6PL24 325 aaPredicted RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC129Q6ZRS4 1044 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 DDX46Q7L014 1031 aaKnown RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 CERS3Q8IU89 383 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 DHX37Q8IY37 1157 aaKnown RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 CDC5LQ99459 802 aaKnown RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 RSPH14Q9UHP6 348 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 PSDA5PKW4 1024 aaPredicted RBP6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 GBP6Q6ZN66 633 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 MFSD6Q6ZSS7 791 aa6.99□□□□□ -1.29
PRPF4B-205ENST00000480058 PRAG1Q86YV5 1406 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 SNRPA1P09661 255 aaKnown RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 TMEM67Q5HYA8 995 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 PPIP5K1Q6PFW1 1433 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 IFNL2Q8IZJ0 200 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 GPR161Q8N6U8 529 aaKnown RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 TMEM87BQ96K49 555 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 ZHX1Q9UKY1 873 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 MSH6P52701 1360 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 KLF18A0A0U1RQI7 1052 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 IDEP14735 1019 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 PPP2R3AQ06190 1150 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 SETDB1Q15047 1291 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 ZNF444Q8N0Y2 327 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 TRIML1Q8N9V2 468 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 SMC6Q96SB8 1091 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 SWAP70Q9UH65 585 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 RTL1A6NKG5 1358 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 EVCP57679 992 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 BICDL1Q6ZP65 573 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 KRI1Q8N9T8 703 aaKnown RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 MKNK2Q9HBH9 465 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 FEZ2Q9UHY8 353 aaPredicted RBP6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 PI4KAP2A4QPH2 592 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 FYB1O15117 783 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 PI4KAP1Q8N8J0 262 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 ALG1Q9BT22 464 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 SAMD15Q9P1V8 674 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 IKBKGQ9Y6K9 419 aa6.98□□□□□ -1.29
PRPF4B-205ENST00000480058 RPL13P26373 211 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CEP85Q6P2H3 762 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ZGPATQ8N5A5 531 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 TMCO5BA8MYB1 307 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ACTN4O43707 911 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ZNF76P36508 570 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 BAG1Q99933 345 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CSRNP2Q9H175 543 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 PTPN23Q9H3S7 1636 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 PLCD1P51178 756 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 WTAPQ15007 396 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC6Q16204 474 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC114Q96M63 670 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CWC25Q9NXE8 425 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 MYO1AQ9UBC5 1043 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 TCOF1Q13428 1488 aaKnown RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 KIAA0232Q92628 1395 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 AKR1B15C9JRZ8 316 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 GRM8O00222 908 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms