RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 PI4KAP1Q8N8J0 262 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 TBC1D16Q8TBP0 767 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 CHMP4AQ9BY43 222 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 CNOT7Q9UIV1 285 aaKnown RBP8.59□□□□□ -1.03
FN1-220ENST00000480024 RTL9Q8NET4 1388 aa8.59□□□□□ -1.03
FN1-220ENST00000480024 POLR2AP24928 1970 aaKnown RBP8.59□□□□□ -1.03
FN1-220ENST00000480024 H7C1D1 291 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 CTCFP49711 727 aaPredicted RBP8.58□□□□□ -1.04
FN1-220ENST00000480024 CTSWP56202 376 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 CWF19L2Q2TBE0 894 aaKnown RBP8.58□□□□□ -1.04
FN1-220ENST00000480024 TBC1D10BQ4KMP7 808 aaPredicted RBP8.58□□□□□ -1.04
FN1-220ENST00000480024 KSR2Q6VAB6 950 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 G2E3Q7L622 706 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 CAPNS2Q96L46 248 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 GGA1Q9UJY5 639 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 SALL2Q9Y467 1007 aaPredicted RBP8.58□□□□□ -1.04
FN1-220ENST00000480024 TLL2Q9Y6L7 1015 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 CACNA1FO60840 1977 aa8.58□□□□□ -1.04
FN1-220ENST00000480024 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 G3V3G9 751 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 ANP32CO43423 234 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 EGFRP00533 1210 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 ECE1P42892 770 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 LBX1P52954 281 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
FN1-220ENST00000480024 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
FN1-220ENST00000480024 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 SAMD7Q7Z3H4 446 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 ANKRD18AQ8IVF6 992 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
FN1-220ENST00000480024 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
FN1-220ENST00000480024 PODXL2Q9NZ53 605 aa8.57□□□□□ -1.04
FN1-220ENST00000480024 XDHP47989 1333 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 IL16Q14005 1332 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 AOC2O75106 756 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 SLC4A2P04920 1241 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 HSPA8P11142 646 aaKnown RBP8.56□□□□□ -1.04
FN1-220ENST00000480024 RPS12P25398 132 aaKnown RBP8.56□□□□□ -1.04
FN1-220ENST00000480024 FLIIQ13045 1269 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 KIF4BQ2VIQ3 1234 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 DLK2Q6UY11 383 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 SAPCD2Q86UD0 394 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 USP48Q86UV5 1035 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 DPF2Q92785 391 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 CDC5LQ99459 802 aaKnown RBP8.56□□□□□ -1.04
FN1-220ENST00000480024 GREM2Q9H772 168 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 PGAP2Q9UHJ9 254 aa8.56□□□□□ -1.04
FN1-220ENST00000480024 ZNF646O15015 1829 aaPredicted RBP8.55□□□□□ -1.04
FN1-220ENST00000480024 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
FN1-220ENST00000480024 ADM5C9JUS6 153 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
FN1-220ENST00000480024 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
FN1-220ENST00000480024 KRT26Q7Z3Y9 468 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 TTLL11Q8NHH1 800 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 GGA3Q9NZ52 723 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 A0A1B0GUL6 1792 aa8.55□□□□□ -1.04
FN1-220ENST00000480024 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
FN1-220ENST00000480024 MED23Q9ULK4 1368 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 WTIPA6NIX2 430 aaPredicted RBP8.54□□□□□ -1.04
FN1-220ENST00000480024 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
FN1-220ENST00000480024 ATP2B4P23634 1241 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 GCKRQ14397 625 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 DNAAF4Q8WXU2 420 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 DCPSQ96C86 337 aaKnown RBP8.54□□□□□ -1.04
FN1-220ENST00000480024 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 ZNF609O15014 1411 aa8.54□□□□□ -1.04
FN1-220ENST00000480024 H7C1W4 665 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 ITGA6P23229 1130 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 IGHMBP2P38935 993 aaKnown RBP8.53□□□□□ -1.04
FN1-220ENST00000480024 HUNKP57058 714 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
FN1-220ENST00000480024 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
FN1-220ENST00000480024 FBXW7Q969H0 707 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 HHIPL1Q96JK4 782 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
FN1-220ENST00000480024 MINPP1Q9UNW1 487 aa8.53□□□□□ -1.04
FN1-220ENST00000480024 CASP8AP2Q9UKL3 1982 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 VAMP4O75379 141 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 KLRK1P26718 216 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 MAP2K2P36507 400 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
FN1-220ENST00000480024 CASP7P55210 303 aa8.52□□□□□ -1.05
FN1-220ENST00000480024 ZNF280AP59817 542 aaPredicted RBP8.52□□□□□ -1.05
FN1-220ENST00000480024 NCBP3Q53F19 620 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms