RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 JARID2Q92833 1246 aaPredicted RBP29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 CWC25Q9NXE8 425 aaPredicted RBP29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 KIF3AQ9Y496 699 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 CAVIN2O95810 425 aa29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 STK3Q13188 491 aa29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 CFAP45Q9UL16 551 aa29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 HMGN5P82970 282 aaKnown RBP29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 DHX32Q7L7V1 743 aaKnown RBP29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 MRVI1Q9Y6F6 885 aa29.08■■■□□ 2.25
SYNGAP1-206ENST00000479510 SPEF2Q9C093 1822 aa29.08■■■□□ 2.24
SYNGAP1-206ENST00000479510 NAA16Q6N069 864 aaPredicted RBP29.07■■■□□ 2.24
SYNGAP1-206ENST00000479510 ATG9AQ7Z3C6 839 aa29.07■■■□□ 2.24
SYNGAP1-206ENST00000479510 DACT1Q9NYF0 836 aa29.07■■■□□ 2.24
SYNGAP1-206ENST00000479510 DTNBO60941 627 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 FAM173BQ6P4H8 233 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 BRF1Q92994 677 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 AGXT2Q9BYV1 514 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 PAG1Q9NWQ8 432 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 CIAO1O76071 339 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 HSP90B1P14625 803 aaKnown RBP29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 DDX46Q7L014 1031 aaKnown RBP29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 TTC12Q9H892 705 aaPredicted RBP29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 NUP188Q5SRE5 1749 aa29.06■■■□□ 2.24
SYNGAP1-206ENST00000479510 H3BQV1 296 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 PIP4K2AP48426 406 aaPredicted RBP29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 ZMYM1Q5SVZ6 1142 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 IFFO2Q5TF58 517 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 ATL3Q6DD88 541 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 CCDC129Q6ZRS4 1044 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 CCDC191Q8NCU4 936 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 SPATA31A3Q5VYP0 1347 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 NBPF26B4DH59 902 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 ERVV-2B6SEH9 535 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 JAK2O60674 1132 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 NBPF14Q5TI25 921 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 NBPF10Q6P3W6 841 aaKnown RBP29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 CADPS2Q86UW7 1296 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 NBPF15Q8N660 670 aa29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 SEC62Q99442 399 aaKnown RBP29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 TFIP11Q9UBB9 837 aaKnown RBP29.05■■■□□ 2.24
SYNGAP1-206ENST00000479510 UBR2Q8IWV8 1755 aa29.04■■■□□ 2.24
SYNGAP1-206ENST00000479510 MYRIPQ8NFW9 859 aa29.04■■■□□ 2.24
SYNGAP1-206ENST00000479510 PCDH11XQ9BZA7 1347 aa29.04■■■□□ 2.24
SYNGAP1-206ENST00000479510 PCDH11YQ9BZA8 1340 aa29.04■■■□□ 2.24
SYNGAP1-206ENST00000479510 AP5Z1O43299 807 aa29.03■■■□□ 2.24
SYNGAP1-206ENST00000479510 ZNF830Q96NB3 372 aaPredicted RBP29.03■■■□□ 2.24
SYNGAP1-206ENST00000479510 FGD1P98174 961 aa29.02■■■□□ 2.24
SYNGAP1-206ENST00000479510 EXOSC10Q01780 885 aaKnown RBP29.02■■■□□ 2.24
SYNGAP1-206ENST00000479510 SCRN1Q12765 414 aa29.02■■■□□ 2.24
SYNGAP1-206ENST00000479510 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
SYNGAP1-206ENST00000479510 TJP1Q07157 1748 aa29.02■■■□□ 2.24
SYNGAP1-206ENST00000479510 EYA2O00167 538 aa29.01■■■□□ 2.24
SYNGAP1-206ENST00000479510 DNTTIP2Q5QJE6 756 aaKnown RBP29.01■■■□□ 2.24
SYNGAP1-206ENST00000479510 STOX1Q6ZVD7 989 aa29.01■■■□□ 2.24
SYNGAP1-206ENST00000479510 FBXL16Q8N461 479 aa29.01■■■□□ 2.24
SYNGAP1-206ENST00000479510 NDUFB9Q9Y6M9 179 aa29.01■■■□□ 2.24
SYNGAP1-206ENST00000479510 LRRFIP1Q32MZ4 808 aaKnown RBP29.01■■■□□ 2.23
SYNGAP1-206ENST00000479510 KIAA1524Q8TCG1 905 aa29.01■■■□□ 2.23
SYNGAP1-206ENST00000479510 PGBD1Q96JS3 809 aa29.01■■■□□ 2.23
SYNGAP1-206ENST00000479510 FBXO3Q9UK99 471 aa29.01■■■□□ 2.23
SYNGAP1-206ENST00000479510 GOLIM4O00461 696 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 PLCB2Q00722 1185 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 NSUN7Q8NE18 718 aaKnown RBP29■■■□□ 2.23
SYNGAP1-206ENST00000479510 CAMK4Q16566 473 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29■■■□□ 2.23
SYNGAP1-206ENST00000479510 TDRD7Q8NHU6 1098 aaKnown RBP29■■■□□ 2.23
SYNGAP1-206ENST00000479510 BICD2Q8TD16 824 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 NEUROD6Q96NK8 337 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 CHMP3Q9Y3E7 222 aa29■■■□□ 2.23
SYNGAP1-206ENST00000479510 NKX1-1Q15270 411 aaPredicted RBP28.99■■■□□ 2.23
SYNGAP1-206ENST00000479510 PAPPAQ13219 1627 aa28.99■■■□□ 2.23
SYNGAP1-206ENST00000479510 CTAGE5O15320 804 aa28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 RNF113AO15541 343 aaKnown RBP28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 GTF2F1P35269 517 aaKnown RBP eCLIP28.98■■■□□ 2.232e-6■■■■■ 29.6
SYNGAP1-206ENST00000479510 ZNF274Q96GC6 653 aaPredicted RBP28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 CBX8Q9HC52 389 aa28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 RCOR1Q9UKL0 485 aa28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 KCPQ6ZWJ8 1503 aa28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 ANO6Q4KMQ2 910 aa28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 ZCRB1Q8TBF4 217 aaKnown RBP28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 DDX17Q92841 729 aaKnown RBP28.98■■■□□ 2.23
SYNGAP1-206ENST00000479510 TTLL7Q6ZT98 887 aa28.97■■■□□ 2.23
SYNGAP1-206ENST00000479510 LAMA4Q16363 1823 aa28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 WDR17Q8IZU2 1322 aa28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 NR1I2O75469 434 aa28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 IFIT1P09914 478 aaKnown RBP28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 HSPD1P10809 573 aaKnown RBP28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 CKAP2LQ8IYA6 745 aa28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 KCNF1Q9H3M0 494 aa28.96■■■□□ 2.23
SYNGAP1-206ENST00000479510 CHGBP05060 677 aa28.95■■■□□ 2.23
SYNGAP1-206ENST00000479510 MPNDQ8N594 471 aa28.95■■■□□ 2.23
SYNGAP1-206ENST00000479510 FAM13BQ9NYF5 915 aa28.95■■■□□ 2.23
SYNGAP1-206ENST00000479510 SALL1Q9NSC2 1324 aa28.95■■■□□ 2.22
SYNGAP1-206ENST00000479510 E7EWF7 191 aa28.95■■■□□ 2.22
SYNGAP1-206ENST00000479510 ADD1P35611 737 aaKnown RBP28.95■■■□□ 2.22
SYNGAP1-206ENST00000479510 LUZP1Q86V48 1076 aa28.95■■■□□ 2.22
SYNGAP1-206ENST00000479510 DDX11Q96FC9 970 aa28.95■■■□□ 2.22
SYNGAP1-206ENST00000479510 ZNF396Q96N95 335 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms