RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 VAMP4O75379 141 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
CMTM1-208ENST00000479381 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
CMTM1-208ENST00000479381 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
CMTM1-208ENST00000479381 EYA3Q99504 573 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
CMTM1-208ENST00000479381 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
CMTM1-208ENST00000479381 E9PSI1 815 aa11.53□□□□□ -0.56
CMTM1-208ENST00000479381 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
CMTM1-208ENST00000479381 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
CMTM1-208ENST00000479381 RPS8P62241 208 aaKnown RBP11.53□□□□□ -0.56
CMTM1-208ENST00000479381 SF3B3Q15393 1217 aaKnown RBP11.53□□□□□ -0.56
CMTM1-208ENST00000479381 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
CMTM1-208ENST00000479381 F6X3S4 739 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 UFL1O94874 794 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 EPHX2P34913 555 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 CTSWP56202 376 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 WASHC4Q2M389 1173 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 GPC2Q8N158 579 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
CMTM1-208ENST00000479381 MYH3P11055 1940 aa11.52□□□□□ -0.57
CMTM1-208ENST00000479381 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 FZD9O00144 591 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 RAD17O75943 681 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 KCNJ4P48050 445 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
CMTM1-208ENST00000479381 DBNDD1Q9H9R9 158 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 CDHR2Q9BYE9 1310 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 SCN4AP35499 1836 aa11.51□□□□□ -0.57
CMTM1-208ENST00000479381 GPSM2P81274 684 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 HTRA3P83110 453 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 GCKRQ14397 625 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 TNIP1Q15025 636 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-208ENST00000479381 PNMA8AQ86V59 439 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-208ENST00000479381 LDHDQ86WU2 507 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 VPS33BQ9H267 617 aa11.5□□□□□ -0.57
CMTM1-208ENST00000479381 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-208ENST00000479381 KIAA2012Q0VF49 1180 aa11.49□□□□□ -0.57
CMTM1-208ENST00000479381 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
CMTM1-208ENST00000479381 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
CMTM1-208ENST00000479381 GPR101Q96P66 508 aaPredicted RBP11.49□□□□□ -0.57
CMTM1-208ENST00000479381 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
CMTM1-208ENST00000479381 GREM2Q9H772 168 aa11.49□□□□□ -0.57
CMTM1-208ENST00000479381 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
CMTM1-208ENST00000479381 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 POTECB2RU33 542 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
CMTM1-208ENST00000479381 TIE1P35590 1138 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
CMTM1-208ENST00000479381 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
CMTM1-208ENST00000479381 XDHP47989 1333 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 H7C1D1 291 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 ECE2O60344 883 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 ITGA6P23229 1130 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 ATP2B4P23634 1241 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
CMTM1-208ENST00000479381 CXCL9Q07325 125 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 TBC1D16Q8TBP0 767 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
CMTM1-208ENST00000479381 RTFDC1Q9BY42 306 aaPredicted RBP11.47□□□□□ -0.57
CMTM1-208ENST00000479381 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 COL4A5P29400 1685 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 SNED1Q8TER0 1413 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 H7C1W4 665 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 EPS15P42566 896 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
CMTM1-208ENST00000479381 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 IFIT5Q13325 482 aaKnown RBP11.46□□□□□ -0.57
CMTM1-208ENST00000479381 CCDC57Q2TAC2 916 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
CMTM1-208ENST00000479381 MAP1SQ66K74 1059 aaPredicted RBP11.46□□□□□ -0.57
CMTM1-208ENST00000479381 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
CMTM1-208ENST00000479381 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
CMTM1-208ENST00000479381 ZNF521Q96K83 1311 aa11.45□□□□□ -0.58
CMTM1-208ENST00000479381 GRM8O00222 908 aa11.45□□□□□ -0.58
CMTM1-208ENST00000479381 PLIN1O60240 522 aa11.45□□□□□ -0.58
CMTM1-208ENST00000479381 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
CMTM1-208ENST00000479381 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
CMTM1-208ENST00000479381 ZNF408Q9H9D4 720 aa11.45□□□□□ -0.58
CMTM1-208ENST00000479381 CNNM1Q9NRU3 951 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms