RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ZNF468Q5VIY5 522 aaPredicted RBP8.22□□□□□ -1.09
RFC4-212ENST00000479307 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
RFC4-212ENST00000479307 EREGO14944 169 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 KIF4AO95239 1232 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 BMP4P12644 408 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 NRLP54845 237 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 PSMD2Q13200 908 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 MRPL58Q14197 206 aaKnown RBP8.21□□□□□ -1.1
RFC4-212ENST00000479307 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
RFC4-212ENST00000479307 SETDB2Q96T68 719 aa8.21□□□□□ -1.1
RFC4-212ENST00000479307 SORBS3O60504 671 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 SIN3BO75182 1162 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 MAP2K3P46734 347 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 HYAL2Q12891 473 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 RAB44Q7Z6P3 723 aaPredicted RBP8.2□□□□□ -1.1
RFC4-212ENST00000479307 SRCIN1Q9C0H9 1055 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 NPHS2Q9NP85 383 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 SALL4Q9UJQ4 1053 aa8.2□□□□□ -1.1
RFC4-212ENST00000479307 CYP2E1P05181 493 aaPredicted RBP8.19□□□□□ -1.1
RFC4-212ENST00000479307 ARAFP10398 606 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 GPLD1P80108 840 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.19□□□□□ -1.1
RFC4-212ENST00000479307 SYT9Q86SS6 491 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 AK5Q9Y6K8 562 aa8.19□□□□□ -1.1
RFC4-212ENST00000479307 C2CD2LO14523 706 aa8.18□□□□□ -1.1
RFC4-212ENST00000479307 GAS6Q14393 721 aa8.18□□□□□ -1.1
RFC4-212ENST00000479307 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
RFC4-212ENST00000479307 TNFRSF25Q93038 417 aa8.18□□□□□ -1.1
RFC4-212ENST00000479307 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
RFC4-212ENST00000479307 ZCCHC6Q5VYS8 1495 aaKnown RBP8.18□□□□□ -1.1
RFC4-212ENST00000479307 RECKO95980 971 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
RFC4-212ENST00000479307 ADH6P28332 368 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 KIAA0319Q5VV43 1072 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 EPS8L3Q8TE67 593 aaKnown RBP8.17□□□□□ -1.1
RFC4-212ENST00000479307 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 SUV39H2Q9H5I1 410 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 C12orf49Q9H741 205 aa8.17□□□□□ -1.1
RFC4-212ENST00000479307 EIF4BP23588 611 aaKnown RBP8.16□□□□□ -1.1
RFC4-212ENST00000479307 IRS1P35568 1242 aa8.16□□□□□ -1.1
RFC4-212ENST00000479307 GPR161Q8N6U8 529 aaKnown RBP8.16□□□□□ -1.1
RFC4-212ENST00000479307 FAM161BQ96MY7 647 aa8.16□□□□□ -1.1
RFC4-212ENST00000479307 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
RFC4-212ENST00000479307 VTI1BQ9UEU0 232 aa8.16□□□□□ -1.1
RFC4-212ENST00000479307 TRAK1Q9UPV9 953 aa8.16□□□□□ -1.1
RFC4-212ENST00000479307 NESP48681 1621 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 BAZ1AQ9NRL2 1556 aaPredicted RBP8.15□□□□□ -1.1
RFC4-212ENST00000479307 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 GADD45BO75293 160 aaPredicted RBP8.15□□□□□ -1.1
RFC4-212ENST00000479307 SIK1P57059 783 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
RFC4-212ENST00000479307 PI16Q6UXB8 463 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 IRF7Q92985 503 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 CRELD1Q96HD1 420 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
RFC4-212ENST00000479307 RBSNQ9H1K0 784 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 RNF19AQ9NV58 838 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 PPP4R2Q9NY27 417 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
RFC4-212ENST00000479307 A0A1W2PP55 124 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 ADARB2-AS1A8MUL3 147 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 PCBP4P57723 403 aaKnown RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 SRSF11Q05519 484 aaKnown RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 TSNAXIP1Q2TAA8 658 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 CEP120Q8N960 986 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 BCO2Q9BYV7 579 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 OSBPL7Q9BZF2 842 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 EHD4Q9H223 541 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 IGSF5Q9NSI5 407 aa8.14□□□□□ -1.11
RFC4-212ENST00000479307 DNAJB12Q9NXW2 375 aaKnown RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 GDF2Q9UK05 429 aaPredicted RBP8.14□□□□□ -1.11
RFC4-212ENST00000479307 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 GHRHP01286 108 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 GRM2Q14416 872 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
RFC4-212ENST00000479307 GOLGA6L1Q8N7Z2 621 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
RFC4-212ENST00000479307 IGF1RP08069 1367 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 TCF3P15923 654 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 OSMRQ99650 979 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 MDFIQ99750 246 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 ZKSCAN3Q9BRR0 538 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 LATS2Q9NRM7 1088 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
RFC4-212ENST00000479307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
RFC4-212ENST00000479307 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 ERBB4Q15303 1308 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 ELOA3DA6NLF2 546 aaPredicted RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 SCAMP3O14828 347 aaKnown RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 XRCC5P13010 732 aaKnown RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 GSTT1P30711 240 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms