RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 DNAAF4Q8WXU2 420 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 JARID2Q92833 1246 aaPredicted RBP25.37■■□□□ 1.65
HPS4-211ENST00000479064 PLA2G12BQ9BX93 195 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 DBNDD1Q9H9R9 158 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 ANKIB1Q9P2G1 1089 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 GGA1Q9UJY5 639 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 XDHP47989 1333 aa25.37■■□□□ 1.65
HPS4-211ENST00000479064 H7C1D1 291 aa25.36■■□□□ 1.65
HPS4-211ENST00000479064 RIMBP2O15034 1052 aa25.36■■□□□ 1.65
HPS4-211ENST00000479064 ECE2O60344 883 aa25.36■■□□□ 1.65
HPS4-211ENST00000479064 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
HPS4-211ENST00000479064 FAM9BQ8IZU0 186 aa25.36■■□□□ 1.65
HPS4-211ENST00000479064 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
HPS4-211ENST00000479064 CNOT7Q9UIV1 285 aaKnown RBP25.36■■□□□ 1.65
HPS4-211ENST00000479064 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
HPS4-211ENST00000479064 PSMD14O00487 310 aa25.35■■□□□ 1.65
HPS4-211ENST00000479064 UFL1O94874 794 aa25.35■■□□□ 1.65
HPS4-211ENST00000479064 GCKRQ14397 625 aa25.35■■□□□ 1.65
HPS4-211ENST00000479064 PSME4Q14997 1843 aa25.35■■□□□ 1.65
HPS4-211ENST00000479064 BSDC1Q9NW68 430 aaPredicted RBP25.34■■□□□ 1.65
HPS4-211ENST00000479064 ZNF609O15014 1411 aa25.34■■□□□ 1.65
HPS4-211ENST00000479064 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
HPS4-211ENST00000479064 ATP2B4P23634 1241 aa25.33■■□□□ 1.65
HPS4-211ENST00000479064 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
HPS4-211ENST00000479064 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
HPS4-211ENST00000479064 CCDC85AQ96PX6 553 aaPredicted RBP25.33■■□□□ 1.65
HPS4-211ENST00000479064 VEGFBP49765 207 aa25.32■■□□□ 1.64
HPS4-211ENST00000479064 MICALL2Q8IY33 904 aa25.32■■□□□ 1.64
HPS4-211ENST00000479064 GREM2Q9H772 168 aa25.32■■□□□ 1.64
HPS4-211ENST00000479064 SPINK5Q9NQ38 1064 aaPredicted RBP25.32■■□□□ 1.64
HPS4-211ENST00000479064 VIL1P09327 827 aaKnown RBP25.31■■□□□ 1.64
HPS4-211ENST00000479064 HIRAP54198 1017 aaPredicted RBP25.31■■□□□ 1.64
HPS4-211ENST00000479064 CASP7P55210 303 aa25.31■■□□□ 1.64
HPS4-211ENST00000479064 ZNF521Q96K83 1311 aa25.31■■□□□ 1.64
HPS4-211ENST00000479064 DOK7Q18PE1 504 aa25.3■■□□□ 1.64
HPS4-211ENST00000479064 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
HPS4-211ENST00000479064 ABT1Q9ULW3 272 aaKnown RBP25.3■■□□□ 1.64
HPS4-211ENST00000479064 ZBTB12Q9Y330 459 aaPredicted RBP25.3■■□□□ 1.64
HPS4-211ENST00000479064 SPEF2Q9C093 1822 aa25.3■■□□□ 1.64
HPS4-211ENST00000479064 G3V3G9 751 aa25.29■■□□□ 1.64
HPS4-211ENST00000479064 CSF1RP07333 972 aa25.29■■□□□ 1.64
HPS4-211ENST00000479064 DCAF8Q5TAQ9 597 aa25.29■■□□□ 1.64
HPS4-211ENST00000479064 CDC37L1Q7L3B6 337 aa25.29■■□□□ 1.64
HPS4-211ENST00000479064 GPR101Q96P66 508 aaPredicted RBP25.29■■□□□ 1.64
HPS4-211ENST00000479064 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
HPS4-211ENST00000479064 CST9Q5W186 159 aa25.28■■□□□ 1.64
HPS4-211ENST00000479064 PODNQ7Z5L7 613 aa25.28■■□□□ 1.64
HPS4-211ENST00000479064 MED23Q9ULK4 1368 aa25.28■■□□□ 1.64
HPS4-211ENST00000479064 TRAF5O00463 557 aa25.27■■□□□ 1.64
HPS4-211ENST00000479064 IGHMBP2P38935 993 aaKnown RBP25.27■■□□□ 1.64
HPS4-211ENST00000479064 COL13A1Q5TAT6 717 aaPredicted RBP25.27■■□□□ 1.64
HPS4-211ENST00000479064 AGBL3Q8NEM8 1001 aa25.27■■□□□ 1.64
HPS4-211ENST00000479064 KCNQ5Q9NR82 932 aa25.27■■□□□ 1.64
HPS4-211ENST00000479064 TLL2Q9Y6L7 1015 aa25.27■■□□□ 1.64
HPS4-211ENST00000479064 THSD7BQ9C0I4 1608 aa25.26■■□□□ 1.63
HPS4-211ENST00000479064 ECE1P42892 770 aa25.26■■□□□ 1.63
HPS4-211ENST00000479064 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
HPS4-211ENST00000479064 POLR2AP24928 1970 aaKnown RBP25.25■■□□□ 1.63
HPS4-211ENST00000479064 SHTN1A0MZ66 631 aa25.25■■□□□ 1.63
HPS4-211ENST00000479064 ITGA6P23229 1130 aa25.25■■□□□ 1.63
HPS4-211ENST00000479064 FMR1Q06787 632 aaKnown RBP eCLIP25.25■■□□□ 1.63
HPS4-211ENST00000479064 BEND3Q5T5X7 828 aa25.25■■□□□ 1.63
HPS4-211ENST00000479064 HHIPL1Q96JK4 782 aa25.25■■□□□ 1.63
HPS4-211ENST00000479064 GLIS2Q9BZE0 524 aaPredicted RBP25.25■■□□□ 1.63
HPS4-211ENST00000479064 LEMD3Q9Y2U8 911 aa25.25■■□□□ 1.63
HPS4-211ENST00000479064 CCT4P50991 539 aaKnown RBP25.24■■□□□ 1.63
HPS4-211ENST00000479064 RSBN1LQ6PCB5 846 aaPredicted RBP25.24■■□□□ 1.63
HPS4-211ENST00000479064 SAMD7Q7Z3H4 446 aa25.24■■□□□ 1.63
HPS4-211ENST00000479064 ANKRD2Q9GZV1 360 aa25.24■■□□□ 1.63
HPS4-211ENST00000479064 WBP1LQ9NX94 342 aa25.24■■□□□ 1.63
HPS4-211ENST00000479064 AIDAQ96BJ3 306 aa25.23■■□□□ 1.63
HPS4-211ENST00000479064 CELF2O95319 508 aaKnown RBP25.22■■□□□ 1.63
HPS4-211ENST00000479064 ZNF280AP59817 542 aaPredicted RBP25.22■■□□□ 1.63
HPS4-211ENST00000479064 MAP2K1Q02750 393 aaPredicted RBP25.22■■□□□ 1.63
HPS4-211ENST00000479064 FAM161AQ3B820 660 aa25.22■■□□□ 1.63
HPS4-211ENST00000479064 SAPCD2Q86UD0 394 aa25.22■■□□□ 1.63
HPS4-211ENST00000479064 MPHOSPH8Q99549 860 aa25.22■■□□□ 1.63
HPS4-211ENST00000479064 USP17L3A6NCW0 530 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 USP17L4A6NCW7 530 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 F6X3S4 739 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 ALDH1L1O75891 902 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 TBC1D10BQ4KMP7 808 aaPredicted RBP25.21■■□□□ 1.63
HPS4-211ENST00000479064 USP17L1Q7RTZ2 530 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 GMLQ99445 158 aa25.21■■□□□ 1.63
HPS4-211ENST00000479064 ANKRD18BA2A2Z9 1011 aa25.2■■□□□ 1.62
HPS4-211ENST00000479064 CTCFP49711 727 aaPredicted RBP25.2■■□□□ 1.62
HPS4-211ENST00000479064 KIF4BQ2VIQ3 1234 aa25.2■■□□□ 1.62
HPS4-211ENST00000479064 COA1Q9GZY4 146 aa25.2■■□□□ 1.62
HPS4-211ENST00000479064 PRDM10Q9NQV6 1147 aa25.2■■□□□ 1.62
HPS4-211ENST00000479064 FOXN1O15353 648 aa25.19■■□□□ 1.62
HPS4-211ENST00000479064 EGFRP00533 1210 aa25.19■■□□□ 1.62
HPS4-211ENST00000479064 MMP14P50281 582 aa25.19■■□□□ 1.62
HPS4-211ENST00000479064 DCPSQ96C86 337 aaKnown RBP25.19■■□□□ 1.62
HPS4-211ENST00000479064 E9PSI1 815 aa25.18■■□□□ 1.62
HPS4-211ENST00000479064 GRM8O00222 908 aa25.18■■□□□ 1.62
HPS4-211ENST00000479064 FOXO4P98177 505 aa25.18■■□□□ 1.62
HPS4-211ENST00000479064 KRT26Q7Z3Y9 468 aa25.18■■□□□ 1.62
HPS4-211ENST00000479064 USP48Q86UV5 1035 aa25.18■■□□□ 1.62
HPS4-211ENST00000479064 TNS4Q8IZW8 715 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms