RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
CCDC78-210ENST00000478979 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
CCDC78-210ENST00000478979 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
CCDC78-210ENST00000478979 CAMK4Q16566 473 aa16.64■□□□□ 0.25
CCDC78-210ENST00000478979 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-210ENST00000478979 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
CCDC78-210ENST00000478979 GOLIM4O00461 696 aa16.64■□□□□ 0.25
CCDC78-210ENST00000478979 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
CCDC78-210ENST00000478979 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
CCDC78-210ENST00000478979 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
CCDC78-210ENST00000478979 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-210ENST00000478979 LRMPQ12912 555 aa16.63■□□□□ 0.25
CCDC78-210ENST00000478979 UTYO14607 1347 aa16.63■□□□□ 0.25
CCDC78-210ENST00000478979 JAK2O60674 1132 aa16.63■□□□□ 0.25
CCDC78-210ENST00000478979 TERF2Q15554 542 aa16.63■□□□□ 0.25
CCDC78-210ENST00000478979 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
CCDC78-210ENST00000478979 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 A0A0G2JS52 829 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
CCDC78-210ENST00000478979 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 TNNT1P13805 278 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 LRP10Q7Z4F1 713 aa16.62■□□□□ 0.25
CCDC78-210ENST00000478979 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
CCDC78-210ENST00000478979 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 COL15A1P39059 1388 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 TRPM3Q9HCF6 1732 aaPredicted RBP16.61■□□□□ 0.25
CCDC78-210ENST00000478979 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 HIP1O00291 1037 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 TAF5LO75529 589 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 PSMA5P28066 241 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
CCDC78-210ENST00000478979 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 TOB2Q14106 344 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 ZNF142P52746 1687 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 MST1RQ04912 1400 aa16.6■□□□□ 0.25
CCDC78-210ENST00000478979 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
CCDC78-210ENST00000478979 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
CCDC78-210ENST00000478979 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-210ENST00000478979 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
CCDC78-210ENST00000478979 KRT222Q8N1A0 295 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 Q6ZUG5 572 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC78-210ENST00000478979 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
CCDC78-210ENST00000478979 BRF1Q92994 677 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
CCDC78-210ENST00000478979 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.25
CCDC78-210ENST00000478979 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.25
CCDC78-210ENST00000478979 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 OVOS2A0A0G2JMS6 1433 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 ERICH4A6NGS2 130 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 CYP21A2P08686 494 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 ATP5JP18859 108 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
CCDC78-210ENST00000478979 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-210ENST00000478979 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 LUZP1Q86V48 1076 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 TIGD1Q96MW7 591 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 PAXBP1Q9Y5B6 917 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 ZNF609O15014 1411 aa16.58■□□□□ 0.24
CCDC78-210ENST00000478979 NEK1Q96PY6 1258 aa16.57■□□□□ 0.24
CCDC78-210ENST00000478979 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
CCDC78-210ENST00000478979 SCN11AQ9UI33 1791 aa16.57■□□□□ 0.24
CCDC78-210ENST00000478979 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
CCDC78-210ENST00000478979 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
CCDC78-210ENST00000478979 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
CCDC78-210ENST00000478979 GOLGA6L4A6NEF3 574 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 LIG1P18858 919 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 EVA1CP58658 441 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 ZNF592Q92610 1267 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-210ENST00000478979 GUCY1B3Q02153 619 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-210ENST00000478979 KMT5BQ4FZB7 885 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 FOXO4P98177 505 aa16.56■□□□□ 0.24
CCDC78-210ENST00000478979 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 GPTP24298 496 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 HAND2P61296 217 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-210ENST00000478979 FAM89AQ96GI7 184 aa16.55■□□□□ 0.24
CCDC78-210ENST00000478979 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
CCDC78-210ENST00000478979 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms