RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 POLLQ9UGP5 575 aa11.16□□□□□ -0.62
XRCC6-208ENST00000478914 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
XRCC6-208ENST00000478914 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
XRCC6-208ENST00000478914 YDJCA8MPS7 323 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 ECE2O60344 883 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 UFL1O94874 794 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
XRCC6-208ENST00000478914 CWF19L2Q2TBE0 894 aaKnown RBP11.15□□□□□ -0.62
XRCC6-208ENST00000478914 G2E3Q7L622 706 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 TBC1D16Q8TBP0 767 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
XRCC6-208ENST00000478914 VAMP4O75379 141 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 UBE3BQ7Z3V4 1068 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
XRCC6-208ENST00000478914 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
XRCC6-208ENST00000478914 XDHP47989 1333 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 PSMD14O00487 310 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
XRCC6-208ENST00000478914 GCKRQ14397 625 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
XRCC6-208ENST00000478914 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 TTLL11Q8NHH1 800 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 DPF2Q92785 391 aa11.13□□□□□ -0.63
XRCC6-208ENST00000478914 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
XRCC6-208ENST00000478914 H7C1W4 665 aa11.12□□□□□ -0.63
XRCC6-208ENST00000478914 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
XRCC6-208ENST00000478914 VEGFBP49765 207 aa11.12□□□□□ -0.63
XRCC6-208ENST00000478914 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
XRCC6-208ENST00000478914 AIDAQ96BJ3 306 aa11.12□□□□□ -0.63
XRCC6-208ENST00000478914 GREM2Q9H772 168 aa11.12□□□□□ -0.63
XRCC6-208ENST00000478914 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
XRCC6-208ENST00000478914 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
XRCC6-208ENST00000478914 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 TRAF5O00463 557 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 ECE1P42892 770 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 CDC37L1Q7L3B6 337 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
XRCC6-208ENST00000478914 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
XRCC6-208ENST00000478914 CELF2O95319 508 aaKnown RBP11.1□□□□□ -0.63
XRCC6-208ENST00000478914 ITGA6P23229 1130 aa11.1□□□□□ -0.63
XRCC6-208ENST00000478914 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
XRCC6-208ENST00000478914 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
XRCC6-208ENST00000478914 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
XRCC6-208ENST00000478914 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
XRCC6-208ENST00000478914 GLIS2Q9BZE0 524 aaPredicted RBP11.1□□□□□ -0.63
XRCC6-208ENST00000478914 ZNF408Q9H9D4 720 aa11.1□□□□□ -0.63
XRCC6-208ENST00000478914 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
XRCC6-208ENST00000478914 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
XRCC6-208ENST00000478914 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 MED23Q9ULK4 1368 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 F6X3S4 739 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 GRM1Q13255 1194 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 SAMD7Q7Z3H4 446 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 DCPSQ96C86 337 aaKnown RBP11.09□□□□□ -0.63
XRCC6-208ENST00000478914 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 THSD7BQ9C0I4 1608 aa11.09□□□□□ -0.63
XRCC6-208ENST00000478914 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 KCNJ4P48050 445 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 MAP2K1Q02750 393 aaPredicted RBP11.08□□□□□ -0.64
XRCC6-208ENST00000478914 KIF4BQ2VIQ3 1234 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 CST9Q5W186 159 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
XRCC6-208ENST00000478914 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 AGBL3Q8NEM8 1001 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
XRCC6-208ENST00000478914 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
XRCC6-208ENST00000478914 FOXN1O15353 648 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 CSF1RP07333 972 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 CTCFP49711 727 aaPredicted RBP11.07□□□□□ -0.64
XRCC6-208ENST00000478914 CASP7P55210 303 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
XRCC6-208ENST00000478914 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 BEND3Q5T5X7 828 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 KRT26Q7Z3Y9 468 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 USP48Q86UV5 1035 aa11.07□□□□□ -0.64
XRCC6-208ENST00000478914 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms