RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
GARNL3-215ENST00000478702 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 H7C1D1 291 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 PSMD14O00487 310 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 EGFRP00533 1210 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 RGS19P49795 217 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 SF3B3Q15393 1217 aaKnown RBP20.29■□□□□ 0.84
GARNL3-215ENST00000478702 ANKRD13DQ6ZTN6 518 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 SAMD7Q7Z3H4 446 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
GARNL3-215ENST00000478702 DBNDD1Q9H9R9 158 aa20.29■□□□□ 0.84
GARNL3-215ENST00000478702 ATP5J2-PTCD1G3V325 749 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 CA12O43570 354 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 WASHC4Q2M389 1173 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 DPF2Q92785 391 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 POLLQ9UGP5 575 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
GARNL3-215ENST00000478702 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
GARNL3-215ENST00000478702 RIMBP2O15034 1052 aa20.27■□□□□ 0.84
GARNL3-215ENST00000478702 GPSM2P81274 684 aa20.27■□□□□ 0.84
GARNL3-215ENST00000478702 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
GARNL3-215ENST00000478702 KCNQ5Q9NR82 932 aa20.27■□□□□ 0.84
GARNL3-215ENST00000478702 MYH3P11055 1940 aa20.27■□□□□ 0.84
GARNL3-215ENST00000478702 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
GARNL3-215ENST00000478702 TBC1D10BQ4KMP7 808 aaPredicted RBP20.26■□□□□ 0.83
GARNL3-215ENST00000478702 MCOLN1Q9GZU1 580 aa20.26■□□□□ 0.83
GARNL3-215ENST00000478702 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
GARNL3-215ENST00000478702 HUNKP57058 714 aa20.25■□□□□ 0.83
GARNL3-215ENST00000478702 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
GARNL3-215ENST00000478702 MYH16Q9H6N6 1097 aa20.25■□□□□ 0.83
GARNL3-215ENST00000478702 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
GARNL3-215ENST00000478702 ECE2O60344 883 aa20.24■□□□□ 0.83
GARNL3-215ENST00000478702 MLLT1Q03111 559 aaPredicted RBP20.24■□□□□ 0.83
GARNL3-215ENST00000478702 NOGQ13253 232 aa20.24■□□□□ 0.83
GARNL3-215ENST00000478702 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
GARNL3-215ENST00000478702 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
GARNL3-215ENST00000478702 FAM155AB1AL88 458 aaPredicted RBP20.23■□□□□ 0.83
GARNL3-215ENST00000478702 ADM5C9JUS6 153 aa20.23■□□□□ 0.83
GARNL3-215ENST00000478702 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
GARNL3-215ENST00000478702 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
GARNL3-215ENST00000478702 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
GARNL3-215ENST00000478702 RIC3Q7Z5B4 369 aa20.23■□□□□ 0.83
GARNL3-215ENST00000478702 TBC1D16Q8TBP0 767 aa20.23■□□□□ 0.83
GARNL3-215ENST00000478702 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
GARNL3-215ENST00000478702 SLC34A2O95436 690 aa20.22■□□□□ 0.83
GARNL3-215ENST00000478702 KRT26Q7Z3Y9 468 aa20.22■□□□□ 0.83
GARNL3-215ENST00000478702 VAMP4O75379 141 aa20.21■□□□□ 0.83
GARNL3-215ENST00000478702 RPS12P25398 132 aaKnown RBP20.21■□□□□ 0.83
GARNL3-215ENST00000478702 DGKZQ13574 1117 aa20.21■□□□□ 0.83
GARNL3-215ENST00000478702 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
GARNL3-215ENST00000478702 RGMBQ6NW40 437 aa20.21■□□□□ 0.83
GARNL3-215ENST00000478702 GBA2Q9HCG7 927 aaPredicted RBP20.21■□□□□ 0.83
GARNL3-215ENST00000478702 RPS8P62241 208 aaKnown RBP20.2■□□□□ 0.82
GARNL3-215ENST00000478702 EYA3Q99504 573 aa20.2■□□□□ 0.82
GARNL3-215ENST00000478702 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
GARNL3-215ENST00000478702 TNRC18O15417 2968 aaPredicted RBP20.2■□□□□ 0.82
GARNL3-215ENST00000478702 ASTN2O75129 1339 aaPredicted RBP20.2■□□□□ 0.82
GARNL3-215ENST00000478702 KIF4BQ2VIQ3 1234 aa20.19■□□□□ 0.82
GARNL3-215ENST00000478702 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
GARNL3-215ENST00000478702 G2E3Q7L622 706 aa20.19■□□□□ 0.82
GARNL3-215ENST00000478702 MYD88Q99836 296 aa20.19■□□□□ 0.82
GARNL3-215ENST00000478702 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
GARNL3-215ENST00000478702 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
GARNL3-215ENST00000478702 SLC4A2P04920 1241 aa20.18■□□□□ 0.82
GARNL3-215ENST00000478702 VIL1P09327 827 aaKnown RBP20.18■□□□□ 0.82
GARNL3-215ENST00000478702 KSR2Q6VAB6 950 aa20.18■□□□□ 0.82
GARNL3-215ENST00000478702 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
GARNL3-215ENST00000478702 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
GARNL3-215ENST00000478702 ZNF609O15014 1411 aa20.18■□□□□ 0.82
GARNL3-215ENST00000478702 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
GARNL3-215ENST00000478702 FLIIQ13045 1269 aa20.17■□□□□ 0.82
GARNL3-215ENST00000478702 C2orf69Q8N8R5 385 aa20.17■□□□□ 0.82
GARNL3-215ENST00000478702 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
GARNL3-215ENST00000478702 CCDC191Q8NCU4 936 aa20.17■□□□□ 0.82
GARNL3-215ENST00000478702 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
GARNL3-215ENST00000478702 PDE4DIPQ5VU43 2346 aa20.17■□□□□ 0.82
GARNL3-215ENST00000478702 PI4KAP2A4QPH2 592 aa20.16■□□□□ 0.82
GARNL3-215ENST00000478702 PI4KAP1Q8N8J0 262 aa20.16■□□□□ 0.82
GARNL3-215ENST00000478702 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
GARNL3-215ENST00000478702 PAPPA2Q9BXP8 1791 aa20.16■□□□□ 0.82
GARNL3-215ENST00000478702 E9PSI1 815 aa20.15■□□□□ 0.82
GARNL3-215ENST00000478702 UFL1O94874 794 aa20.15■□□□□ 0.82
GARNL3-215ENST00000478702 ZNF157P51786 506 aaPredicted RBP20.15■□□□□ 0.82
GARNL3-215ENST00000478702 CCDC102AQ96A19 550 aa20.15■□□□□ 0.82
GARNL3-215ENST00000478702 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
GARNL3-215ENST00000478702 SAGE1Q9NXZ1 904 aa20.15■□□□□ 0.82
GARNL3-215ENST00000478702 IGKV5-2P06315 115 aa20.14■□□□□ 0.81
GARNL3-215ENST00000478702 SLC10A3P09131 477 aa20.14■□□□□ 0.81
GARNL3-215ENST00000478702 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.81
GARNL3-215ENST00000478702 CDCA5Q96FF9 252 aa20.14■□□□□ 0.81
GARNL3-215ENST00000478702 RNF186Q9NXI6 227 aa20.14■□□□□ 0.81
GARNL3-215ENST00000478702 PCCAP05165 728 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-215ENST00000478702 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-215ENST00000478702 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
GARNL3-215ENST00000478702 FKBP5Q13451 457 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-215ENST00000478702 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
GARNL3-215ENST00000478702 MIER1Q8N108 512 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms