RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 FANCIQ9NVI1 1328 aa28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 FOXN1O15353 648 aa28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 ECE2O60344 883 aa28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 CWF19L2Q2TBE0 894 aaKnown RBP28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 CST9Q5W186 159 aa28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 CNOT7Q9UIV1 285 aaKnown RBP28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 ZNF646O15015 1829 aaPredicted RBP28.19■■■□□ 2.1
MCF2L2-210ENST00000478652 HSP90B1P14625 803 aaKnown RBP28.18■■■□□ 2.1
MCF2L2-210ENST00000478652 TNS4Q8IZW8 715 aa28.18■■■□□ 2.1
MCF2L2-210ENST00000478652 GLIS2Q9BZE0 524 aaPredicted RBP28.18■■■□□ 2.1
MCF2L2-210ENST00000478652 PODXL2Q9NZ53 605 aa28.18■■■□□ 2.1
MCF2L2-210ENST00000478652 MICALL2Q8IY33 904 aa28.17■■■□□ 2.1
MCF2L2-210ENST00000478652 EYA3Q99504 573 aa28.17■■■□□ 2.1
MCF2L2-210ENST00000478652 NEURL1BA8MQ27 555 aa28.16■■■□□ 2.1
MCF2L2-210ENST00000478652 UFL1O94874 794 aa28.16■■■□□ 2.1
MCF2L2-210ENST00000478652 SLC4A2P04920 1241 aa28.16■■■□□ 2.1
MCF2L2-210ENST00000478652 NCBP3Q53F19 620 aaKnown RBP28.16■■■□□ 2.1
MCF2L2-210ENST00000478652 PGAP2Q9UHJ9 254 aa28.16■■■□□ 2.1
MCF2L2-210ENST00000478652 CTSWP56202 376 aa28.15■■■□□ 2.1
MCF2L2-210ENST00000478652 WDR33Q9C0J8 1336 aaKnown RBP28.15■■■□□ 2.1
MCF2L2-210ENST00000478652 ANKIB1Q9P2G1 1089 aa28.14■■■□□ 2.1
MCF2L2-210ENST00000478652 A0A1B0GUL6 1792 aa28.14■■■□□ 2.09
MCF2L2-210ENST00000478652 EGFRP00533 1210 aa28.13■■■□□ 2.09
MCF2L2-210ENST00000478652 NEXNQ0ZGT2 675 aa28.13■■■□□ 2.09
MCF2L2-210ENST00000478652 SAMD7Q7Z3H4 446 aa28.13■■■□□ 2.09
MCF2L2-210ENST00000478652 DPF2Q92785 391 aa28.13■■■□□ 2.09
MCF2L2-210ENST00000478652 GGA1Q9UJY5 639 aa28.13■■■□□ 2.09
MCF2L2-210ENST00000478652 FLIIQ13045 1269 aa28.12■■■□□ 2.09
MCF2L2-210ENST00000478652 ANKRD18AQ8IVF6 992 aa28.12■■■□□ 2.09
MCF2L2-210ENST00000478652 TTLL11Q8NHH1 800 aa28.12■■■□□ 2.09
MCF2L2-210ENST00000478652 ZC3H12CQ9C0D7 883 aaKnown RBP28.12■■■□□ 2.09
MCF2L2-210ENST00000478652 WBP1LQ9NX94 342 aa28.12■■■□□ 2.09
MCF2L2-210ENST00000478652 H7C1D1 291 aa28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 CELF2O95319 508 aaKnown RBP28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 UBE3BQ7Z3V4 1068 aa28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 ZC3H15Q8WU90 426 aaKnown RBP28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 GREM2Q9H772 168 aa28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 SPINK5Q9NQ38 1064 aaPredicted RBP28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 TLL2Q9Y6L7 1015 aa28.11■■■□□ 2.09
MCF2L2-210ENST00000478652 WTIPA6NIX2 430 aaPredicted RBP28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 TBC1D10BQ4KMP7 808 aaPredicted RBP28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 CYP4F22Q6NT55 531 aa28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 DLK2Q6UY11 383 aa28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 PAXIP1Q6ZW49 1069 aaPredicted RBP28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 CAPNS2Q96L46 248 aa28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 XDHP47989 1333 aa28.1■■■□□ 2.09
MCF2L2-210ENST00000478652 H7C1W4 665 aa28.09■■■□□ 2.09
MCF2L2-210ENST00000478652 VAMP4O75379 141 aa28.09■■■□□ 2.09
MCF2L2-210ENST00000478652 WDR63Q8IWG1 891 aa28.09■■■□□ 2.09
MCF2L2-210ENST00000478652 CAPN15O75808 1086 aa28.08■■■□□ 2.09
MCF2L2-210ENST00000478652 GRM1Q13255 1194 aa28.08■■■□□ 2.09
MCF2L2-210ENST00000478652 AIDAQ96BJ3 306 aa28.08■■■□□ 2.09
MCF2L2-210ENST00000478652 RPS12P25398 132 aaKnown RBP28.07■■■□□ 2.08
MCF2L2-210ENST00000478652 FKBP5Q13451 457 aaPredicted RBP28.07■■■□□ 2.08
MCF2L2-210ENST00000478652 GCKRQ14397 625 aa28.07■■■□□ 2.08
MCF2L2-210ENST00000478652 CDC5LQ99459 802 aaKnown RBP28.07■■■□□ 2.08
MCF2L2-210ENST00000478652 ZNF408Q9H9D4 720 aa28.07■■■□□ 2.08
MCF2L2-210ENST00000478652 VIL1P09327 827 aaKnown RBP28.06■■■□□ 2.08
MCF2L2-210ENST00000478652 CASP7P55210 303 aa28.06■■■□□ 2.08
MCF2L2-210ENST00000478652 RBM26Q5T8P6 1007 aaKnown RBP28.06■■■□□ 2.08
MCF2L2-210ENST00000478652 CDC37L1Q7L3B6 337 aa28.06■■■□□ 2.08
MCF2L2-210ENST00000478652 DNAAF4Q8WXU2 420 aa28.06■■■□□ 2.08
MCF2L2-210ENST00000478652 ZNF609O15014 1411 aa28.05■■■□□ 2.08
MCF2L2-210ENST00000478652 CTCFP49711 727 aaPredicted RBP28.05■■■□□ 2.08
MCF2L2-210ENST00000478652 SAPCD2Q86UD0 394 aa28.05■■■□□ 2.08
MCF2L2-210ENST00000478652 USP48Q86UV5 1035 aa28.05■■■□□ 2.08
MCF2L2-210ENST00000478652 FAM9BQ8IZU0 186 aa28.05■■■□□ 2.08
MCF2L2-210ENST00000478652 G3V3G9 751 aa28.04■■■□□ 2.08
MCF2L2-210ENST00000478652 DCAF8Q5TAQ9 597 aa28.04■■■□□ 2.08
MCF2L2-210ENST00000478652 BSDC1Q9NW68 430 aaPredicted RBP28.04■■■□□ 2.08
MCF2L2-210ENST00000478652 MINPP1Q9UNW1 487 aa28.04■■■□□ 2.08
MCF2L2-210ENST00000478652 ATP2B4P23634 1241 aa28.03■■■□□ 2.08
MCF2L2-210ENST00000478652 ECE1P42892 770 aa28.03■■■□□ 2.08
MCF2L2-210ENST00000478652 LBX1P52954 281 aa28.03■■■□□ 2.08
MCF2L2-210ENST00000478652 PLA2G12BQ9BX93 195 aa28.03■■■□□ 2.08
MCF2L2-210ENST00000478652 PRDM10Q9NQV6 1147 aa28.03■■■□□ 2.08
MCF2L2-210ENST00000478652 ASTN2O75129 1339 aaPredicted RBP28.02■■■□□ 2.08
MCF2L2-210ENST00000478652 AOC2O75106 756 aa28.02■■■□□ 2.08
MCF2L2-210ENST00000478652 HSPA8P11142 646 aaKnown RBP28.02■■■□□ 2.08
MCF2L2-210ENST00000478652 KIF4BQ2VIQ3 1234 aa28.02■■■□□ 2.08
MCF2L2-210ENST00000478652 FAM161AQ3B820 660 aa28.02■■■□□ 2.08
MCF2L2-210ENST00000478652 MED23Q9ULK4 1368 aa28.01■■■□□ 2.07
MCF2L2-210ENST00000478652 ADM5C9JUS6 153 aa28.01■■■□□ 2.07
MCF2L2-210ENST00000478652 F6X3S4 739 aa28.01■■■□□ 2.07
MCF2L2-210ENST00000478652 MAP2K1Q02750 393 aaPredicted RBP28.01■■■□□ 2.07
MCF2L2-210ENST00000478652 LINS1Q8NG48 757 aa28.01■■■□□ 2.07
MCF2L2-210ENST00000478652 RSBN1LQ6PCB5 846 aaPredicted RBP28■■■□□ 2.07
MCF2L2-210ENST00000478652 KRT26Q7Z3Y9 468 aa28■■■□□ 2.07
MCF2L2-210ENST00000478652 ITGA6P23229 1130 aa27.99■■■□□ 2.07
MCF2L2-210ENST00000478652 CCT4P50991 539 aaKnown RBP27.99■■■□□ 2.07
MCF2L2-210ENST00000478652 MYH16Q9H6N6 1097 aa27.99■■■□□ 2.07
MCF2L2-210ENST00000478652 GMLQ99445 158 aa27.98■■■□□ 2.07
MCF2L2-210ENST00000478652 GGA3Q9NZ52 723 aa27.98■■■□□ 2.07
MCF2L2-210ENST00000478652 CSF1RP07333 972 aa27.97■■■□□ 2.07
MCF2L2-210ENST00000478652 ZNF280AP59817 542 aaPredicted RBP27.97■■■□□ 2.07
MCF2L2-210ENST00000478652 TXNRD3Q86VQ6 643 aa27.97■■■□□ 2.07
MCF2L2-210ENST00000478652 AGBL3Q8NEM8 1001 aa27.97■■■□□ 2.07
MCF2L2-210ENST00000478652 KLRK1P26718 216 aa27.96■■■□□ 2.07
MCF2L2-210ENST00000478652 IGHMBP2P38935 993 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms