RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CHADLQ6NUI6 762 aa23.89■■□□□ 1.41
SREBF1-212ENST00000478616 SHTN1A0MZ66 631 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 RAD17O75943 681 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 WASHC4Q2M389 1173 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 ANKRD18AQ8IVF6 992 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 DBNDD1Q9H9R9 158 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 MINPP1Q9UNW1 487 aa23.88■■□□□ 1.41
SREBF1-212ENST00000478616 C6orf229H3BNL8 230 aa23.87■■□□□ 1.41
SREBF1-212ENST00000478616 GRM8O00222 908 aa23.87■■□□□ 1.41
SREBF1-212ENST00000478616 ITGBL1O95965 494 aaPredicted RBP23.87■■□□□ 1.41
SREBF1-212ENST00000478616 ITGA6P23229 1130 aa23.87■■□□□ 1.41
SREBF1-212ENST00000478616 BSDC1Q9NW68 430 aaPredicted RBP23.87■■□□□ 1.41
SREBF1-212ENST00000478616 PASKQ96RG2 1323 aa23.86■■□□□ 1.41
SREBF1-212ENST00000478616 ALDH1L1O75891 902 aa23.86■■□□□ 1.41
SREBF1-212ENST00000478616 DOK7Q18PE1 504 aa23.86■■□□□ 1.41
SREBF1-212ENST00000478616 LDHDQ86WU2 507 aa23.86■■□□□ 1.41
SREBF1-212ENST00000478616 UTYO14607 1347 aa23.85■■□□□ 1.41
SREBF1-212ENST00000478616 UFL1O94874 794 aa23.85■■□□□ 1.41
SREBF1-212ENST00000478616 NBPF7P0C2Y1 421 aaPredicted RBP23.85■■□□□ 1.41
SREBF1-212ENST00000478616 GMPSP49915 693 aaPredicted RBP23.85■■□□□ 1.41
SREBF1-212ENST00000478616 CIAPIN1Q6FI81 312 aa23.85■■□□□ 1.41
SREBF1-212ENST00000478616 SLC4A10Q6U841 1118 aa23.85■■□□□ 1.41
SREBF1-212ENST00000478616 CDC5LQ99459 802 aaKnown RBP23.85■■□□□ 1.41
SREBF1-212ENST00000478616 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
SREBF1-212ENST00000478616 XDHP47989 1333 aa23.84■■□□□ 1.41
SREBF1-212ENST00000478616 ECE2O60344 883 aa23.84■■□□□ 1.41
SREBF1-212ENST00000478616 ALDH1L2Q3SY69 923 aa23.84■■□□□ 1.41
SREBF1-212ENST00000478616 SUCLG2Q96I99 432 aa23.84■■□□□ 1.41
SREBF1-212ENST00000478616 SRCIN1Q9C0H9 1055 aa23.84■■□□□ 1.41
SREBF1-212ENST00000478616 PSMD14O00487 310 aa23.83■■□□□ 1.41
SREBF1-212ENST00000478616 EAPPQ56P03 285 aaPredicted RBP23.83■■□□□ 1.41
SREBF1-212ENST00000478616 ANKIB1Q9P2G1 1089 aa23.83■■□□□ 1.41
SREBF1-212ENST00000478616 GGA1Q9UJY5 639 aa23.83■■□□□ 1.41
SREBF1-212ENST00000478616 PTPRCP08575 1304 aa23.83■■□□□ 1.4
SREBF1-212ENST00000478616 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
SREBF1-212ENST00000478616 KLRK1P26718 216 aa23.82■■□□□ 1.4
SREBF1-212ENST00000478616 HIRAP54198 1017 aaPredicted RBP23.82■■□□□ 1.4
SREBF1-212ENST00000478616 TXNRD3Q86VQ6 643 aa23.82■■□□□ 1.4
SREBF1-212ENST00000478616 ZBTB12Q9Y330 459 aaPredicted RBP23.82■■□□□ 1.4
SREBF1-212ENST00000478616 POLR2AP24928 1970 aaKnown RBP23.82■■□□□ 1.4
SREBF1-212ENST00000478616 MAP1SQ66K74 1059 aaPredicted RBP23.81■■□□□ 1.4
SREBF1-212ENST00000478616 LMBR1LQ6UX01 489 aa23.81■■□□□ 1.4
SREBF1-212ENST00000478616 SNAP23O00161 211 aa23.8■■□□□ 1.4
SREBF1-212ENST00000478616 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
SREBF1-212ENST00000478616 FMR1Q06787 632 aaKnown RBP eCLIP23.8■■□□□ 1.4
SREBF1-212ENST00000478616 ZNF594Q96JF6 807 aaPredicted RBP23.8■■□□□ 1.4
SREBF1-212ENST00000478616 EYA3Q99504 573 aa23.8■■□□□ 1.4
SREBF1-212ENST00000478616 EGFRP00533 1210 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 ATP2B4P23634 1241 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 CCT4P50991 539 aaKnown RBP23.79■■□□□ 1.4
SREBF1-212ENST00000478616 RARSP54136 660 aaKnown RBP23.79■■□□□ 1.4
SREBF1-212ENST00000478616 PNMA8AQ86V59 439 aaPredicted RBP23.79■■□□□ 1.4
SREBF1-212ENST00000478616 ANKRD44Q8N8A2 993 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 TRPM4Q8TD43 1214 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 TRPM7Q96QT4 1865 aa23.79■■□□□ 1.4
SREBF1-212ENST00000478616 MED23Q9ULK4 1368 aa23.78■■□□□ 1.4
SREBF1-212ENST00000478616 CT47B1P0C2W7 299 aaPredicted RBP23.78■■□□□ 1.4
SREBF1-212ENST00000478616 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
SREBF1-212ENST00000478616 SMC4Q9NTJ3 1288 aa23.78■■□□□ 1.4
SREBF1-212ENST00000478616 ZNF609O15014 1411 aa23.77■■□□□ 1.4
SREBF1-212ENST00000478616 LMOD1P29536 600 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-212ENST00000478616 TNIP1Q15025 636 aa23.77■■□□□ 1.4
SREBF1-212ENST00000478616 RABL6Q3YEC7 729 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-212ENST00000478616 USP50Q70EL3 339 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-212ENST00000478616 ADARB2Q9NS39 739 aaKnown RBP23.77■■□□□ 1.4
SREBF1-212ENST00000478616 C9orf78Q9NZ63 289 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-212ENST00000478616 ANKRD18BA2A2Z9 1011 aa23.76■■□□□ 1.39
SREBF1-212ENST00000478616 VIL1P09327 827 aaKnown RBP23.76■■□□□ 1.39
SREBF1-212ENST00000478616 IGHMBP2P38935 993 aaKnown RBP23.76■■□□□ 1.39
SREBF1-212ENST00000478616 CHRNDQ07001 517 aa23.76■■□□□ 1.39
SREBF1-212ENST00000478616 CNTROBQ8N137 903 aa23.76■■□□□ 1.39
SREBF1-212ENST00000478616 KLRG1Q96E93 195 aa23.76■■□□□ 1.39
SREBF1-212ENST00000478616 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
SREBF1-212ENST00000478616 PCNTO95613 3336 aa23.75■■□□□ 1.39
SREBF1-212ENST00000478616 GMLQ99445 158 aa23.75■■□□□ 1.39
SREBF1-212ENST00000478616 BICC1Q9H694 974 aaKnown RBP23.75■■□□□ 1.39
SREBF1-212ENST00000478616 PGAP2Q9UHJ9 254 aa23.75■■□□□ 1.39
SREBF1-212ENST00000478616 CNOT7Q9UIV1 285 aaKnown RBP23.75■■□□□ 1.39
SREBF1-212ENST00000478616 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
SREBF1-212ENST00000478616 TAF5LO75529 589 aa23.74■■□□□ 1.39
SREBF1-212ENST00000478616 IFIT5Q13325 482 aaKnown RBP23.74■■□□□ 1.39
SREBF1-212ENST00000478616 MICALL2Q8IY33 904 aa23.74■■□□□ 1.39
SREBF1-212ENST00000478616 HELBQ8NG08 1087 aaPredicted RBP23.74■■□□□ 1.39
SREBF1-212ENST00000478616 DPF2Q92785 391 aa23.74■■□□□ 1.39
SREBF1-212ENST00000478616 PUS3Q9BZE2 481 aaKnown RBP23.74■■□□□ 1.39
SREBF1-212ENST00000478616 TNNQ9UQP3 1299 aa23.74■■□□□ 1.39
SREBF1-212ENST00000478616 HNRNPUQ00839 825 aaKnown RBP eCLIP23.73■■□□□ 1.39
SREBF1-212ENST00000478616 LEMD3Q9Y2U8 911 aa23.73■■□□□ 1.39
SREBF1-212ENST00000478616 ZNF804BA4D1E1 1349 aa23.73■■□□□ 1.39
SREBF1-212ENST00000478616 SAMD7Q7Z3H4 446 aa23.72■■□□□ 1.39
SREBF1-212ENST00000478616 JMYQ8N9B5 988 aa23.72■■□□□ 1.39
SREBF1-212ENST00000478616 MPHOSPH8Q99549 860 aa23.72■■□□□ 1.39
SREBF1-212ENST00000478616 CHMP3Q9Y3E7 222 aa23.72■■□□□ 1.39
SREBF1-212ENST00000478616 TRAF5O00463 557 aa23.71■■□□□ 1.39
SREBF1-212ENST00000478616 MXD3Q9BW11 206 aa23.71■■□□□ 1.39
SREBF1-212ENST00000478616 CREBZFQ9NS37 354 aa23.71■■□□□ 1.39
SREBF1-212ENST00000478616 DLK2Q6UY11 383 aa23.7■■□□□ 1.38
SREBF1-212ENST00000478616 ANKRD2Q9GZV1 360 aa23.7■■□□□ 1.38
SREBF1-212ENST00000478616 BCAR3O75815 825 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms