RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
PDCD11-204ENST00000478543 BICC1Q9H694 974 aaKnown RBP14.6□□□□□ -0.07
PDCD11-204ENST00000478543 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
PDCD11-204ENST00000478543 CDHR2Q9BYE9 1310 aa14.6□□□□□ -0.07
PDCD11-204ENST00000478543 IQCA1LA6NCM1 817 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
PDCD11-204ENST00000478543 NPHP1O15259 732 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
PDCD11-204ENST00000478543 DEFB115Q30KQ5 88 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 ANKRD44Q8N8A2 993 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 C7orf43Q8WVR3 580 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 NYXQ9GZU5 481 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 TSKSQ9UJT2 592 aa14.59□□□□□ -0.07
PDCD11-204ENST00000478543 COL4A5P29400 1685 aa14.58□□□□□ -0.07
PDCD11-204ENST00000478543 CHMP3Q9Y3E7 222 aa14.58□□□□□ -0.08
PDCD11-204ENST00000478543 ABCC12Q96J65 1359 aa14.58□□□□□ -0.08
PDCD11-204ENST00000478543 DDX60Q8IY21 1712 aaKnown RBP14.58□□□□□ -0.08
PDCD11-204ENST00000478543 PNMA6EA0A0J9YXQ4 647 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 SRGNP10124 158 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 EPHX2P34913 555 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 PDE6BP35913 854 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 FOXO4P98177 505 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
PDCD11-204ENST00000478543 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 CCDC85AQ96PX6 553 aaPredicted RBP14.57□□□□□ -0.08
PDCD11-204ENST00000478543 LAMB2P55268 1798 aa14.57□□□□□ -0.08
PDCD11-204ENST00000478543 PDE8AO60658 829 aa14.56□□□□□ -0.08
PDCD11-204ENST00000478543 IGHDP01880 384 aa14.56□□□□□ -0.08
PDCD11-204ENST00000478543 LMBR1LQ6UX01 489 aa14.56□□□□□ -0.08
PDCD11-204ENST00000478543 PLA2G12BQ9BX93 195 aa14.56□□□□□ -0.08
PDCD11-204ENST00000478543 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
PDCD11-204ENST00000478543 ZNF277Q9NRM2 450 aaPredicted RBP14.56□□□□□ -0.08
PDCD11-204ENST00000478543 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 CTSWP56202 376 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 MAP2K1Q02750 393 aaPredicted RBP14.55□□□□□ -0.08
PDCD11-204ENST00000478543 STYK1Q6J9G0 422 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 HACL1Q9UJ83 578 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 SNED1Q8TER0 1413 aa14.55□□□□□ -0.08
PDCD11-204ENST00000478543 HMMRO75330 724 aa14.54□□□□□ -0.08
PDCD11-204ENST00000478543 ST5P78524 1137 aa14.54□□□□□ -0.08
PDCD11-204ENST00000478543 HDAC1Q13547 482 aaPredicted RBP14.54□□□□□ -0.08
PDCD11-204ENST00000478543 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
PDCD11-204ENST00000478543 CYP4F22Q6NT55 531 aa14.54□□□□□ -0.08
PDCD11-204ENST00000478543 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
PDCD11-204ENST00000478543 CNKSR1Q969H4 720 aa14.54□□□□□ -0.08
PDCD11-204ENST00000478543 ABT1Q9ULW3 272 aaKnown RBP14.54□□□□□ -0.08
PDCD11-204ENST00000478543 MYH3P11055 1940 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 HSP90B1P14625 803 aaKnown RBP14.53□□□□□ -0.08
PDCD11-204ENST00000478543 MTX1Q13505 466 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 POLA2Q14181 598 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 SLC10A5Q5PT55 438 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 CST9Q5W186 159 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 SLC51AQ86UW1 340 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 SSH3Q8TE77 659 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 MASTLQ96GX5 879 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 PDZRN3Q9UPQ7 1066 aa14.53□□□□□ -0.08
PDCD11-204ENST00000478543 FZD9O00144 591 aa14.52□□□□□ -0.09
PDCD11-204ENST00000478543 AOC2O75106 756 aa14.52□□□□□ -0.09
PDCD11-204ENST00000478543 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.09
PDCD11-204ENST00000478543 KLHDC4Q8TBB5 520 aa14.52□□□□□ -0.09
PDCD11-204ENST00000478543 MCOLN1Q9GZU1 580 aa14.52□□□□□ -0.09
PDCD11-204ENST00000478543 PA2G4Q9UQ80 394 aaKnown RBP14.52□□□□□ -0.09
PDCD11-204ENST00000478543 TRAF5O00463 557 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 CSF1RP07333 972 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 FKBP4Q02790 459 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDCD11-204ENST00000478543 GRM1Q13255 1194 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 CCDC152Q4G0S7 254 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 NLRP3Q96P20 1036 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 GPR101Q96P66 508 aaPredicted RBP14.51□□□□□ -0.09
PDCD11-204ENST00000478543 GREM2Q9H772 168 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 CASP8AP2Q9UKL3 1982 aa14.51□□□□□ -0.09
PDCD11-204ENST00000478543 APBB1O00213 710 aa14.5□□□□□ -0.09
PDCD11-204ENST00000478543 RFX5P48382 616 aaPredicted RBP14.5□□□□□ -0.09
PDCD11-204ENST00000478543 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
PDCD11-204ENST00000478543 CENPQQ7L2Z9 268 aaPredicted RBP14.5□□□□□ -0.09
PDCD11-204ENST00000478543 ZNF594Q96JF6 807 aaPredicted RBP14.5□□□□□ -0.09
PDCD11-204ENST00000478543 EXOC6BQ9Y2D4 811 aa14.5□□□□□ -0.09
PDCD11-204ENST00000478543 TRPM7Q96QT4 1865 aa14.5□□□□□ -0.09
PDCD11-204ENST00000478543 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 ANKRD18BA2A2Z9 1011 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 SURF6O75683 361 aaKnown RBP14.49□□□□□ -0.09
PDCD11-204ENST00000478543 ITGA6P23229 1130 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
PDCD11-204ENST00000478543 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 SOGA3Q5TF21 947 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 PNMA8AQ86V59 439 aaPredicted RBP14.49□□□□□ -0.09
PDCD11-204ENST00000478543 SIL1Q9H173 461 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
PDCD11-204ENST00000478543 KLRG2A4D1S0 409 aaPredicted RBP14.48□□□□□ -0.09
PDCD11-204ENST00000478543 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
PDCD11-204ENST00000478543 SCNN1DP51172 638 aa14.48□□□□□ -0.09
PDCD11-204ENST00000478543 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
PDCD11-204ENST00000478543 OS9Q13438 667 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms