RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 PRSS36Q5K4E3 855 aa9.55□□□□□ -0.88
SYCP3-205ENST00000478238 C14orf37Q86TY3 774 aa9.55□□□□□ -0.88
SYCP3-205ENST00000478238 TP53INP1Q96A56 240 aa9.55□□□□□ -0.88
SYCP3-205ENST00000478238 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
SYCP3-205ENST00000478238 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
SYCP3-205ENST00000478238 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
SYCP3-205ENST00000478238 FOXD4L6Q3SYB3 417 aaPredicted RBP9.54□□□□□ -0.88
SYCP3-205ENST00000478238 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
SYCP3-205ENST00000478238 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
SYCP3-205ENST00000478238 FOXD4L3Q6VB84 417 aaPredicted RBP9.54□□□□□ -0.88
SYCP3-205ENST00000478238 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
SYCP3-205ENST00000478238 STIM2Q9P246 746 aa9.54□□□□□ -0.88
SYCP3-205ENST00000478238 OR13H1Q8NG92 308 aa9.53□□□□□ -0.88
SYCP3-205ENST00000478238 DLL1O00548 723 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 ZBTB39O15060 712 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 NOS3P29474 1203 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
SYCP3-205ENST00000478238 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 ABTB2Q8N961 1025 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 GPR152Q8TDT2 470 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
SYCP3-205ENST00000478238 SEPT3Q9UH03 358 aa9.51□□□□□ -0.89
SYCP3-205ENST00000478238 FNDC3AQ9Y2H6 1198 aaKnown RBP9.51□□□□□ -0.89
SYCP3-205ENST00000478238 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
SYCP3-205ENST00000478238 TRIM33Q9UPN9 1127 aa9.5□□□□□ -0.89
SYCP3-205ENST00000478238 HYAL2Q12891 473 aa9.49□□□□□ -0.89
SYCP3-205ENST00000478238 SCO2A0A1W2PP80 73 aa9.48□□□□□ -0.89
SYCP3-205ENST00000478238 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
SYCP3-205ENST00000478238 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
SYCP3-205ENST00000478238 MEGF10Q96KG7 1140 aa9.48□□□□□ -0.89
SYCP3-205ENST00000478238 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
SYCP3-205ENST00000478238 ATP11AP98196 1134 aa9.47□□□□□ -0.89
SYCP3-205ENST00000478238 CACTIN-AS1Q8N1I8 211 aa9.47□□□□□ -0.89
SYCP3-205ENST00000478238 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
SYCP3-205ENST00000478238 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
SYCP3-205ENST00000478238 SCNN1AP37088 669 aa9.46□□□□□ -0.9
SYCP3-205ENST00000478238 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
SYCP3-205ENST00000478238 SPACA7Q96KW9 195 aa9.46□□□□□ -0.9
SYCP3-205ENST00000478238 KIF4AO95239 1232 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
SYCP3-205ENST00000478238 ATCAYQ86WG3 371 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
SYCP3-205ENST00000478238 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 AKTIPQ9H8T0 292 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
SYCP3-205ENST00000478238 ALX3O95076 343 aa9.44□□□□□ -0.9
SYCP3-205ENST00000478238 CEP135Q66GS9 1140 aa9.44□□□□□ -0.9
SYCP3-205ENST00000478238 PDE12Q6L8Q7 609 aaKnown RBP9.44□□□□□ -0.9
SYCP3-205ENST00000478238 TMEM130Q8N3G9 435 aa9.44□□□□□ -0.9
SYCP3-205ENST00000478238 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
SYCP3-205ENST00000478238 ELP3Q9H9T3 547 aa9.44□□□□□ -0.9
SYCP3-205ENST00000478238 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
SYCP3-205ENST00000478238 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
SYCP3-205ENST00000478238 ARTNQ5T4W7 220 aa9.43□□□□□ -0.9
SYCP3-205ENST00000478238 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
SYCP3-205ENST00000478238 RASSF4Q9H2L5 321 aa9.43□□□□□ -0.9
SYCP3-205ENST00000478238 TMEM63CQ9P1W3 806 aa9.43□□□□□ -0.9
SYCP3-205ENST00000478238 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
SYCP3-205ENST00000478238 ZNF438Q7Z4V0 828 aa9.42□□□□□ -0.9
SYCP3-205ENST00000478238 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
SYCP3-205ENST00000478238 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
SYCP3-205ENST00000478238 CDC27P30260 824 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 GALNT11Q8NCW6 608 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 EDEM1Q92611 657 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 PBX4Q9BYU1 374 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 ZFP64Q9NPA5 681 aa9.41□□□□□ -0.9
SYCP3-205ENST00000478238 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 RPLP1P05386 114 aaKnown RBP9.4□□□□□ -0.9
SYCP3-205ENST00000478238 TXNDC11Q6PKC3 985 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 PRR23CQ6ZRP0 262 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 CEP120Q8N960 986 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 CNTN3Q9P232 1028 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
SYCP3-205ENST00000478238 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
SYCP3-205ENST00000478238 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
SYCP3-205ENST00000478238 Q6ZS46 218 aa9.39□□□□□ -0.91
SYCP3-205ENST00000478238 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.39□□□□□ -0.91
SYCP3-205ENST00000478238 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
SYCP3-205ENST00000478238 SSFA2P28290 1259 aa9.38□□□□□ -0.91
SYCP3-205ENST00000478238 CDC25BP30305 580 aa9.38□□□□□ -0.91
SYCP3-205ENST00000478238 LRP8Q14114 963 aa9.38□□□□□ -0.91
SYCP3-205ENST00000478238 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
SYCP3-205ENST00000478238 GTF3C2Q8WUA4 911 aaPredicted RBP9.38□□□□□ -0.91
SYCP3-205ENST00000478238 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
SYCP3-205ENST00000478238 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
SYCP3-205ENST00000478238 PDGFAP04085 211 aa9.37□□□□□ -0.91
SYCP3-205ENST00000478238 PCSK2P16519 638 aa9.37□□□□□ -0.91
SYCP3-205ENST00000478238 MPSTP25325 297 aa9.37□□□□□ -0.91
SYCP3-205ENST00000478238 CD68P34810 354 aaPredicted RBP9.37□□□□□ -0.91
SYCP3-205ENST00000478238 EIF1AXP47813 144 aaKnown RBP9.37□□□□□ -0.91
SYCP3-205ENST00000478238 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
SYCP3-205ENST00000478238 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
SYCP3-205ENST00000478238 SALL4Q9UJQ4 1053 aa9.37□□□□□ -0.91
SYCP3-205ENST00000478238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
SYCP3-205ENST00000478238 A6NHS1 94 aa9.36□□□□□ -0.91
SYCP3-205ENST00000478238 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms