RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
CCM2-210ENST00000478169 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
CCM2-210ENST00000478169 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
CCM2-210ENST00000478169 DGKZQ13574 1117 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
CCM2-210ENST00000478169 SAGE1Q9NXZ1 904 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
CCM2-210ENST00000478169 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 RTL9Q8NET4 1388 aa12.55□□□□□ -0.4
CCM2-210ENST00000478169 FAM155AB1AL88 458 aaPredicted RBP12.54□□□□□ -0.4
CCM2-210ENST00000478169 EGFRP00533 1210 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
CCM2-210ENST00000478169 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
CCM2-210ENST00000478169 KCNQ5Q9NR82 932 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 COL4A1P02462 1669 aa12.54□□□□□ -0.4
CCM2-210ENST00000478169 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCM2-210ENST00000478169 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
CCM2-210ENST00000478169 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
CCM2-210ENST00000478169 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
CCM2-210ENST00000478169 ZNF609O15014 1411 aa12.53□□□□□ -0.4
CCM2-210ENST00000478169 ADM5C9JUS6 153 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 G3V3G9 751 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
CCM2-210ENST00000478169 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.41
CCM2-210ENST00000478169 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
CCM2-210ENST00000478169 AGBL3Q8NEM8 1001 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
CCM2-210ENST00000478169 MYH3P11055 1940 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 UFL1O94874 794 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
CCM2-210ENST00000478169 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
CCM2-210ENST00000478169 PDE8AO60658 829 aa12.5□□□□□ -0.41
CCM2-210ENST00000478169 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
CCM2-210ENST00000478169 SLC10A3P09131 477 aa12.5□□□□□ -0.41
CCM2-210ENST00000478169 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
CCM2-210ENST00000478169 FKBP1BP68106 108 aa12.5□□□□□ -0.41
CCM2-210ENST00000478169 RNF186Q9NXI6 227 aa12.5□□□□□ -0.41
CCM2-210ENST00000478169 TRPA1O75762 1119 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 CALD1Q05682 793 aaKnown RBP12.49□□□□□ -0.41
CCM2-210ENST00000478169 SCARF1Q14162 830 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 RSBN1LQ6PCB5 846 aaPredicted RBP12.49□□□□□ -0.41
CCM2-210ENST00000478169 CDCA5Q96FF9 252 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 MYD88Q99836 296 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 PHAXQ9H814 394 aaKnown RBP12.49□□□□□ -0.41
CCM2-210ENST00000478169 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
CCM2-210ENST00000478169 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
CCM2-210ENST00000478169 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 XDHP47989 1333 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 PITPNM2Q9BZ72 1349 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 USP17L8P0C7I0 530 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 ATP2B4P23634 1241 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 GNAI1P63096 354 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
CCM2-210ENST00000478169 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 GMLQ99445 158 aa12.48□□□□□ -0.41
CCM2-210ENST00000478169 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
CCM2-210ENST00000478169 ASTN2O75129 1339 aaPredicted RBP12.47□□□□□ -0.41
CCM2-210ENST00000478169 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
CCM2-210ENST00000478169 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
CCM2-210ENST00000478169 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
CCM2-210ENST00000478169 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
CCM2-210ENST00000478169 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
CCM2-210ENST00000478169 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
CCM2-210ENST00000478169 MYOZ2Q9NPC6 264 aa12.47□□□□□ -0.41
CCM2-210ENST00000478169 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
CCM2-210ENST00000478169 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
CCM2-210ENST00000478169 CDC5LQ99459 802 aaKnown RBP12.46□□□□□ -0.41
CCM2-210ENST00000478169 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
CCM2-210ENST00000478169 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CCM2-210ENST00000478169 MMP14P50281 582 aa12.45□□□□□ -0.42
CCM2-210ENST00000478169 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
CCM2-210ENST00000478169 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
CCM2-210ENST00000478169 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
CCM2-210ENST00000478169 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
CCM2-210ENST00000478169 APAF1O14727 1248 aa12.44□□□□□ -0.42
CCM2-210ENST00000478169 CTSWP56202 376 aa12.44□□□□□ -0.42
CCM2-210ENST00000478169 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
CCM2-210ENST00000478169 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
CCM2-210ENST00000478169 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms