RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 CTSWP56202 376 aa9.21□□□□□ -0.93
SYCP3-204ENST00000478139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.21□□□□□ -0.93
SYCP3-204ENST00000478139 PROM2Q8N271 834 aa9.21□□□□□ -0.93
SYCP3-204ENST00000478139 ESPNB1AK53 854 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 TGFB2P61812 414 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.94
SYCP3-204ENST00000478139 RBM26Q5T8P6 1007 aaKnown RBP9.21□□□□□ -0.94
SYCP3-204ENST00000478139 KIAA1211Q6ZU35 1233 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 LRP2BPQ9P2M1 347 aa9.21□□□□□ -0.94
SYCP3-204ENST00000478139 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 SIRT2Q8IXJ6 389 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 RAI14Q9P0K7 980 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 COL22A1Q8NFW1 1626 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 MYO1BO43795 1136 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 TRIM44Q96DX7 344 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 NWD2Q9ULI1 1742 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 K7ELQ4 463 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 AACSQ86V21 672 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-204ENST00000478139 RILPL2Q969X0 211 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 TOMM22Q9NS69 142 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 EXOC6BQ9Y2D4 811 aa9.2□□□□□ -0.94
SYCP3-204ENST00000478139 APPP05067 770 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 IL15P40933 162 aaPredicted RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 DZIP1Q86YF9 867 aaKnown RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 BICC1Q9H694 974 aaKnown RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 IL1RAPL2Q9NP60 686 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 H7C1D1 291 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
SYCP3-204ENST00000478139 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 KIF1BPQ96EK5 621 aa9.19□□□□□ -0.94
SYCP3-204ENST00000478139 GLI3P10071 1580 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 LRRCC1Q9C099 1032 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 IQSEC3Q9UPP2 1182 aaPredicted RBP9.18□□□□□ -0.94
SYCP3-204ENST00000478139 ANKRD26Q9UPS8 1709 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 GRAPQ13588 217 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 GRAPLQ8TC17 118 aaPredicted RBP9.18□□□□□ -0.94
SYCP3-204ENST00000478139 GCC1Q96CN9 775 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 SYT17Q9BSW7 474 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 PLCH1Q4KWH8 1693 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 F8W031 263 aaPredicted RBP9.18□□□□□ -0.94
SYCP3-204ENST00000478139 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
SYCP3-204ENST00000478139 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
SYCP3-204ENST00000478139 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 IDH1O75874 414 aaKnown RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 LDHCP07864 332 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 NBPF7P0C2Y1 421 aaPredicted RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 BEND3Q5T5X7 828 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 NF2P35240 595 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 TNIP1Q15025 636 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 ZNF594Q96JF6 807 aaPredicted RBP9.17□□□□□ -0.94
SYCP3-204ENST00000478139 ISCA1Q9BUE6 129 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 DIAPH3Q9NSV4 1193 aa9.17□□□□□ -0.94
SYCP3-204ENST00000478139 EYA2O00167 538 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 RAB11FIP3O75154 756 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 GRM1Q13255 1194 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 ZNF34Q8IZ26 560 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 GREM2Q9H772 168 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 DDX49Q9Y6V7 483 aaKnown RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 CDC45O75419 566 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 PDGFDQ9GZP0 370 aaPredicted RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 SEC31BQ9NQW1 1179 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 XDHP47989 1333 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 TAF5LO75529 589 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 NCLP19338 710 aaKnown RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 HIBADHP31937 336 aaKnown RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 STYK1Q6J9G0 422 aa9.16□□□□□ -0.94
SYCP3-204ENST00000478139 CCDC8Q9H0W5 538 aaPredicted RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 PA2G4Q9UQ80 394 aaKnown RBP9.16□□□□□ -0.94
SYCP3-204ENST00000478139 PARP4Q9UKK3 1724 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 FAM208AQ9UK61 1670 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 BAG4O95429 457 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 UQCRFS1P1P0C7P4 283 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 PKP1Q13835 747 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 INTS3Q68E01 1043 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 SYNE4Q8N205 404 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 ZGPATQ8N5A5 531 aaKnown RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 OTUD7AQ8TE49 926 aaPredicted RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 FSD1Q9BTV5 496 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 GPBP1L1Q9HC44 474 aaPredicted RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 ABCC4O15439 1325 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 NASPP49321 788 aaPredicted RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 DDR1Q08345 913 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 HSP90AA2PQ14568 343 aaPredicted RBP9.15□□□□□ -0.94
SYCP3-204ENST00000478139 MCTP1Q6DN14 999 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms