RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
TRIM13-208ENST00000478111 CDC37L1Q7L3B6 337 aa21.59■■□□□ 1.05
TRIM13-208ENST00000478111 SAMD7Q7Z3H4 446 aa21.59■■□□□ 1.05
TRIM13-208ENST00000478111 AOC2O75106 756 aa21.58■■□□□ 1.05
TRIM13-208ENST00000478111 GRM1Q13255 1194 aa21.58■■□□□ 1.05
TRIM13-208ENST00000478111 DLK2Q6UY11 383 aa21.58■■□□□ 1.05
TRIM13-208ENST00000478111 EYA3Q99504 573 aa21.58■■□□□ 1.05
TRIM13-208ENST00000478111 CWC25Q9NXE8 425 aaPredicted RBP21.58■■□□□ 1.05
TRIM13-208ENST00000478111 PSME4Q14997 1843 aa21.57■■□□□ 1.04
TRIM13-208ENST00000478111 MYH3P11055 1940 aa21.57■■□□□ 1.04
TRIM13-208ENST00000478111 PDE8AO60658 829 aa21.57■■□□□ 1.04
TRIM13-208ENST00000478111 HSP90B1P14625 803 aaKnown RBP21.57■■□□□ 1.04
TRIM13-208ENST00000478111 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
TRIM13-208ENST00000478111 HHIPL1Q96JK4 782 aa21.57■■□□□ 1.04
TRIM13-208ENST00000478111 RPS12P25398 132 aaKnown RBP21.56■■□□□ 1.04
TRIM13-208ENST00000478111 MAP2K2P36507 400 aa21.56■■□□□ 1.04
TRIM13-208ENST00000478111 CCDC152Q4G0S7 254 aa21.56■■□□□ 1.04
TRIM13-208ENST00000478111 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
TRIM13-208ENST00000478111 USP48Q86UV5 1035 aa21.56■■□□□ 1.04
TRIM13-208ENST00000478111 TSR2Q969E8 191 aaKnown RBP21.56■■□□□ 1.04
TRIM13-208ENST00000478111 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
TRIM13-208ENST00000478111 IGKV5-2P06315 115 aa21.55■■□□□ 1.04
TRIM13-208ENST00000478111 VIL1P09327 827 aaKnown RBP21.55■■□□□ 1.04
TRIM13-208ENST00000478111 CCDC85AQ96PX6 553 aaPredicted RBP21.55■■□□□ 1.04
TRIM13-208ENST00000478111 ZC3H12CQ9C0D7 883 aaKnown RBP21.55■■□□□ 1.04
TRIM13-208ENST00000478111 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 UFL1O94874 794 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 DDX58O95786 925 aaKnown RBP21.54■■□□□ 1.04
TRIM13-208ENST00000478111 KSR2Q6VAB6 950 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 CHMP4AQ9BY43 222 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 ZNF408Q9H9D4 720 aa21.54■■□□□ 1.04
TRIM13-208ENST00000478111 CCDC27Q2M243 656 aa21.53■■□□□ 1.04
TRIM13-208ENST00000478111 ANKIB1Q9P2G1 1089 aa21.53■■□□□ 1.04
TRIM13-208ENST00000478111 GGA1Q9UJY5 639 aa21.53■■□□□ 1.04
TRIM13-208ENST00000478111 SPEF2Q9C093 1822 aa21.52■■□□□ 1.04
TRIM13-208ENST00000478111 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
TRIM13-208ENST00000478111 WWC1Q8IX03 1113 aa21.52■■□□□ 1.04
TRIM13-208ENST00000478111 G2E3Q7L622 706 aa21.51■■□□□ 1.03
TRIM13-208ENST00000478111 KRT26Q7Z3Y9 468 aa21.51■■□□□ 1.03
TRIM13-208ENST00000478111 BEGAINQ9BUH8 593 aa21.51■■□□□ 1.03
TRIM13-208ENST00000478111 CASP8AP2Q9UKL3 1982 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 ZNF609O15014 1411 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 WTIPA6NIX2 430 aaPredicted RBP21.5■■□□□ 1.03
TRIM13-208ENST00000478111 CTSWP56202 376 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 ANKRD18AQ8IVF6 992 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 TTLL11Q8NHH1 800 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 ZIC5Q96T25 663 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 TSKSQ9UJT2 592 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 XDHP47989 1333 aa21.5■■□□□ 1.03
TRIM13-208ENST00000478111 ADM5C9JUS6 153 aa21.49■■□□□ 1.03
TRIM13-208ENST00000478111 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
TRIM13-208ENST00000478111 ZNF646O15015 1829 aaPredicted RBP21.49■■□□□ 1.03
TRIM13-208ENST00000478111 ASTN2O75129 1339 aaPredicted RBP21.49■■□□□ 1.03
TRIM13-208ENST00000478111 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
TRIM13-208ENST00000478111 HUNKP57058 714 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 ZNF280AP59817 542 aaPredicted RBP21.48■■□□□ 1.03
TRIM13-208ENST00000478111 KIF4BQ2VIQ3 1234 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
TRIM13-208ENST00000478111 DCPSQ96C86 337 aaKnown RBP21.48■■□□□ 1.03
TRIM13-208ENST00000478111 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 GMLQ99445 158 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 GREM2Q9H772 168 aa21.48■■□□□ 1.03
TRIM13-208ENST00000478111 H7C1W4 665 aa21.47■■□□□ 1.03
TRIM13-208ENST00000478111 ATP2B4P23634 1241 aa21.47■■□□□ 1.03
TRIM13-208ENST00000478111 RSBN1LQ6PCB5 846 aaPredicted RBP21.47■■□□□ 1.03
TRIM13-208ENST00000478111 AGBL3Q8NEM8 1001 aa21.47■■□□□ 1.03
TRIM13-208ENST00000478111 STK31Q9BXU1 1019 aa21.47■■□□□ 1.03
TRIM13-208ENST00000478111 G3V3G9 751 aa21.46■■□□□ 1.03
TRIM13-208ENST00000478111 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
TRIM13-208ENST00000478111 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
TRIM13-208ENST00000478111 DCAF8Q5TAQ9 597 aa21.46■■□□□ 1.03
TRIM13-208ENST00000478111 CDC5LQ99459 802 aaKnown RBP21.46■■□□□ 1.03
TRIM13-208ENST00000478111 GBA2Q9HCG7 927 aaPredicted RBP21.46■■□□□ 1.03
TRIM13-208ENST00000478111 BSDC1Q9NW68 430 aaPredicted RBP21.46■■□□□ 1.03
TRIM13-208ENST00000478111 MINPP1Q9UNW1 487 aa21.46■■□□□ 1.03
TRIM13-208ENST00000478111 IL16Q14005 1332 aa21.46■■□□□ 1.03
TRIM13-208ENST00000478111 FAM155AB1AL88 458 aaPredicted RBP21.45■■□□□ 1.02
TRIM13-208ENST00000478111 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
TRIM13-208ENST00000478111 PODNQ7Z5L7 613 aa21.45■■□□□ 1.02
TRIM13-208ENST00000478111 GGA3Q9NZ52 723 aa21.45■■□□□ 1.02
TRIM13-208ENST00000478111 CA12O43570 354 aa21.44■■□□□ 1.02
TRIM13-208ENST00000478111 NOGQ13253 232 aa21.44■■□□□ 1.02
TRIM13-208ENST00000478111 CASP7P55210 303 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 SCARF1Q14162 830 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 RGMBQ6NW40 437 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 UBE3BQ7Z3V4 1068 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 C2orf69Q8N8R5 385 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 MED23Q9ULK4 1368 aa21.43■■□□□ 1.02
TRIM13-208ENST00000478111 USP17L3A6NCW0 530 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 USP17L4A6NCW7 530 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 FLIIQ13045 1269 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 GCKRQ14397 625 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 USP17L1Q7RTZ2 530 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 PLA2G12BQ9BX93 195 aa21.42■■□□□ 1.02
TRIM13-208ENST00000478111 FANCIQ9NVI1 1328 aa21.41■■□□□ 1.02
TRIM13-208ENST00000478111 USP17L8P0C7I0 530 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms