RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 DDX41Q9UJV9 622 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 MORC2Q9Y6X9 1032 aaPredicted RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 AFF2P51816 1311 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 SLIT3O75094 1523 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 RGS22Q8NE09 1264 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 C16orf45Q96MC5 204 aaPredicted RBP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 DNAJC25Q9H1X3 360 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 PFKFB2O60825 505 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 U2AF2P26368 475 aaKnown RBP eCLIP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 C1orf141Q5JVX7 400 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 CCDC73Q6ZRK6 1079 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 NYAP1Q6ZVC0 841 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 CACTINQ8WUQ7 758 aaKnown RBP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 BRF1Q92994 677 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 ERO1AQ96HE7 468 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 PA2G4Q9UQ80 394 aaKnown RBP15.88■□□□□ 0.13
HLA-DMA-208ENST00000477541 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 LRMPQ12912 555 aa15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 COPRSQ9NQ92 184 aa15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 CEP57L1Q8IYX8 460 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 BPIFA3Q9BQP9 254 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 TFIP11Q9UBB9 837 aaKnown RBP15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 LAMA4Q16363 1823 aa15.86■□□□□ 0.13
HLA-DMA-208ENST00000477541 KINO60870 393 aaKnown RBP15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 FAM160A1Q05DH4 1040 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 CADPS2Q86UW7 1296 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 KAZALD1Q96I82 304 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 NRBP1Q9UHY1 535 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 CHMP3Q9Y3E7 222 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 ABCC6O95255 1503 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 BECN2A8MW95 431 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 NRDCO43847 1150 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 FAM173BQ6P4H8 233 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 AGXT2Q9BYV1 514 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 OSBPL5Q9H0X9 879 aaPredicted RBP15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
HLA-DMA-208ENST00000477541 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 CCDC150Q8NCX0 1101 aa15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 KIF18AQ8NI77 898 aa15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
HLA-DMA-208ENST00000477541 A0A1W2PQ27 194 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 A0A1W2PQ64 194 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 A0A1W2PQD8 194 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 FAM177BA6PVY3 158 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 CCP110O43303 1012 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 KCNQ3O43525 872 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 ADD1P35611 737 aaKnown RBP15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 Q6ZUG5 572 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 KRT222Q8N1A0 295 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.13
HLA-DMA-208ENST00000477541 NUTM2BA6NNL0 878 aaPredicted RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 NUTM2EB1AL46 878 aaPredicted RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 SKILP12757 684 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 HSP90B1P14625 803 aaKnown RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCDC144BQ3MJ40 725 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 DHX32Q7L7V1 743 aaKnown RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 NUTM2AQ8IVF1 878 aaPredicted RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCDC144CPQ8IYA2 1237 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 ENGASEQ8NFI3 743 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 DSCC1Q9BVC3 393 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 FAM53CQ9NYF3 392 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 PXDNQ92626 1479 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 TPM4P67936 248 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCAR2Q8N163 923 aaKnown RBP15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 HAUS7Q99871 368 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 HELLSQ9NRZ9 838 aa15.82■□□□□ 0.12
HLA-DMA-208ENST00000477541 SALL1Q9NSC2 1324 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCDC69A6NI79 296 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 JAK2O60674 1132 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 SLU7O95391 586 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 ANXA1P04083 346 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCZ1BP86790 482 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCZ1P86791 482 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms