RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ERVV-1B6SEH8 477 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 IL6STP40189 918 aaPredicted RBP8.16□□□□□ -1.1
LDB3-206ENST00000477489 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
LDB3-206ENST00000477489 AIMP1Q12904 312 aaKnown RBP8.16□□□□□ -1.1
LDB3-206ENST00000477489 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
LDB3-206ENST00000477489 KIF6Q6ZMV9 814 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 SEPT12Q8IYM1 358 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 SNX21Q969T3 373 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 MYD88Q99836 296 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 PLA2G12BQ9BX93 195 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 THSD7AQ9UPZ6 1657 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 PCDHGA10Q9Y5H3 936 aa8.16□□□□□ -1.1
LDB3-206ENST00000477489 TNS1Q9HBL0 1735 aaKnown RBP8.15□□□□□ -1.1
LDB3-206ENST00000477489 RFX7Q2KHR2 1363 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 GLRX3O76003 335 aaKnown RBP8.15□□□□□ -1.1
LDB3-206ENST00000477489 HSP90B1P14625 803 aaKnown RBP8.15□□□□□ -1.1
LDB3-206ENST00000477489 SDSP20132 328 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 CASP7P55210 303 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 G3BP1Q13283 466 aaKnown RBP eCLIP8.15□□□□□ -1.1
LDB3-206ENST00000477489 KAZALD1Q96I82 304 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 SUCLG2Q96I99 432 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 AK7Q96M32 723 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 ANP32EQ9BTT0 268 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 GPR108Q9NPR9 543 aa8.15□□□□□ -1.1
LDB3-206ENST00000477489 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.11
LDB3-206ENST00000477489 MAP3K15Q6ZN16 1313 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 CDHR2Q9BYE9 1310 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 CHD4Q14839 1912 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 A0A087WZG4 1122 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 HIP1O00291 1037 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 PTCD1O75127 700 aaKnown RBP8.14□□□□□ -1.11
LDB3-206ENST00000477489 CYP19A1P11511 503 aaPredicted RBP8.14□□□□□ -1.11
LDB3-206ENST00000477489 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
LDB3-206ENST00000477489 OS9Q13438 667 aaPredicted RBP8.14□□□□□ -1.11
LDB3-206ENST00000477489 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 KRT27Q7Z3Y8 459 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 CNTROBQ8N137 903 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 IL17RAQ96F46 866 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 ZBED2Q9BTP6 218 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 BICC1Q9H694 974 aaKnown RBP8.14□□□□□ -1.11
LDB3-206ENST00000477489 ECHDC1Q9NTX5 307 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 ASAP1Q9ULH1 1129 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 KAT6BQ8WYB5 2073 aa8.14□□□□□ -1.11
LDB3-206ENST00000477489 MYH3P11055 1940 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 NUP98P52948 1817 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
LDB3-206ENST00000477489 CIAO1O76071 339 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 PHF14O94880 888 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 A1BGP04217 495 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 PCCAP05165 728 aaPredicted RBP8.13□□□□□ -1.11
LDB3-206ENST00000477489 MCCP23508 829 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 ANAPC15P60006 121 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 RABEP1Q15276 862 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 TYW1BQ6NUM6 668 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
LDB3-206ENST00000477489 DNAJC10Q8IXB1 793 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 C16orf71Q8IYS4 520 aaPredicted RBP8.13□□□□□ -1.11
LDB3-206ENST00000477489 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
LDB3-206ENST00000477489 IFIT2P09913 472 aaKnown RBP8.12□□□□□ -1.11
LDB3-206ENST00000477489 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
LDB3-206ENST00000477489 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
LDB3-206ENST00000477489 MYT1Q01538 1121 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 ZBTB38Q8NAP3 1195 aaPredicted RBP8.12□□□□□ -1.11
LDB3-206ENST00000477489 PI4K2BQ8TCG2 481 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 OTUD7AQ8TE49 926 aaPredicted RBP8.12□□□□□ -1.11
LDB3-206ENST00000477489 RUFY2Q8WXA3 655 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 HCSTQ9UBK5 93 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 LAMB2P55268 1798 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
LDB3-206ENST00000477489 RAD50Q92878 1312 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 APBB1O00213 710 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 IL15P40933 162 aaPredicted RBP8.11□□□□□ -1.11
LDB3-206ENST00000477489 EIF5P55010 431 aaKnown RBP8.11□□□□□ -1.11
LDB3-206ENST00000477489 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
LDB3-206ENST00000477489 EVI5LQ96CN4 794 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 USP26Q9BXU7 913 aa8.11□□□□□ -1.11
LDB3-206ENST00000477489 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
LDB3-206ENST00000477489 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 ONECUT3O60422 494 aaPredicted RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 SASH1O94885 1247 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 CHMLP26374 656 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 MCM2P49736 904 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 SIK1P57059 783 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 FOXO4P98177 505 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 EZH2Q15910 746 aaKnown RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms