RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 HDGFL1Q5TGJ6 251 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 SULF1Q8IWU6 871 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 CELF1Q92879 486 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 EYA3Q99504 573 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 GGA3Q9NZ52 723 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 PGAP2Q9UHJ9 254 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 TRPA1O75762 1119 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 EGFRP00533 1210 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 TMPOP42166 694 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 RGS19P49795 217 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 DPF2Q92785 391 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 CCDC102AQ96A19 550 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 ZC3H12CQ9C0D7 883 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 KCNQ5Q9NR82 932 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 PDE4DIPQ5VU43 2346 aa8.7□□□□□ -1.02
RTFDC1-206ENST00000477485 IRS4O14654 1257 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 UFL1O94874 794 aa8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 RPS12P25398 132 aaKnown RBP8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 CCDC85AQ96PX6 553 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 POLLQ9UGP5 575 aa8.69□□□□□ -1.02
RTFDC1-206ENST00000477485 PAPPA2Q9BXP8 1791 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 WDR43Q15061 677 aaKnown RBP eCLIP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 ANGEL2Q5VTE6 544 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 CDCA5Q96FF9 252 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 BABAM1Q9NWV8 329 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 RNF186Q9NXI6 227 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 SAGE1Q9NXZ1 904 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 DBF4Q9UBU7 674 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 ASTN2O75129 1339 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 RTL9Q8NET4 1388 aa8.68□□□□□ -1.02
RTFDC1-206ENST00000477485 RPS8P62241 208 aaKnown RBP8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 JARID2Q92833 1246 aaPredicted RBP8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 SEC31BQ9NQW1 1179 aa8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 HDAC9Q9UKV0 1011 aa8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 SCAF8Q9UPN6 1271 aaKnown RBP8.67□□□□□ -1.02
RTFDC1-206ENST00000477485 SLC10A3P09131 477 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 SCARF1Q14162 830 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 SF3B3Q15393 1217 aaKnown RBP8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 RASAL3Q86YV0 1011 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 MYD88Q99836 296 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 HYPKQ9NX55 129 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 ECM29Q5VYK3 1845 aa8.66□□□□□ -1.02
RTFDC1-206ENST00000477485 ELL2O00472 640 aaPredicted RBP8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 CHL1O00533 1208 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 CCDC152Q4G0S7 254 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 CTU1Q7Z7A3 348 aaKnown RBP8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 CSRNP1Q96S65 589 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 MYOZ2Q9NPC6 264 aa8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 ZNF646O15015 1829 aaPredicted RBP8.65□□□□□ -1.02
RTFDC1-206ENST00000477485 UBE2Q2LH0YL09 131 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 TBC1D8O95759 1140 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 VIL1P09327 827 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 HOXB7P09629 217 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 NF2P35240 595 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 PRKG1Q13976 671 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 RALBP1Q15311 655 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 ANKRD18AQ8IVF6 992 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 ZBTB38Q8NAP3 1195 aaPredicted RBP8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
RTFDC1-206ENST00000477485 XDHP47989 1333 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 PDE8AO60658 829 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 AGBL3Q8NEM8 1001 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 CWC25Q9NXE8 425 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 PODXL2Q9NZ53 605 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
RTFDC1-206ENST00000477485 SASH1O94885 1247 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 ATP2B4P23634 1241 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 ZNF280AP59817 542 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 FKBP1BP68106 108 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms