RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IQCB1Q15051 598 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 ME3Q16798 604 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 CCZ1BP86790 482 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 CCZ1P86791 482 aaPredicted RBP17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 IL1RAPL2Q9NP60 686 aa17.89■□□□□ 0.45
CLSTN1-205ENST00000477264 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
CLSTN1-205ENST00000477264 BICD2Q8TD16 824 aa17.88■□□□□ 0.45
CLSTN1-205ENST00000477264 ARGLU1Q9NWB6 273 aaPredicted RBP17.88■□□□□ 0.45
CLSTN1-205ENST00000477264 IMPACTQ9P2X3 320 aa17.88■□□□□ 0.45
CLSTN1-205ENST00000477264 CCDC69A6NI79 296 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 TPM4P67936 248 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 CWC27Q6UX04 472 aaKnown RBP17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 ATP8B1O43520 1251 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 ADAMTS2O95450 1211 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 IL2RBP14784 551 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 PHKG2P15735 406 aa17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
CLSTN1-205ENST00000477264 ERICH4A6NGS2 130 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 HIP1O00291 1037 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 ZBTB22O15209 634 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 TXLNBQ8N3L3 684 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 USP27XA6NNY8 438 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NRDCO43847 1150 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NECTIN1Q15223 517 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 PRPF40BQ6NWY9 871 aaKnown RBP17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 CCDC150Q8NCX0 1101 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 GPATCH3Q96I76 525 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 ZNF446Q9NWS9 450 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 CHMP3Q9Y3E7 222 aa17.86■□□□□ 0.45
CLSTN1-205ENST00000477264 NR1I2O75469 434 aa17.85■□□□□ 0.45
CLSTN1-205ENST00000477264 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
CLSTN1-205ENST00000477264 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
CLSTN1-205ENST00000477264 OSBPL5Q9H0X9 879 aaPredicted RBP17.85■□□□□ 0.45
CLSTN1-205ENST00000477264 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.85■□□□□ 0.45
CLSTN1-205ENST00000477264 CCP110O43303 1012 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 CPA1P15085 419 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 ADCK5Q3MIX3 580 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 TPCN1Q9ULQ1 816 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 FHOD1Q9Y613 1164 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 TPM1P09493 284 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 ANO10Q9NW15 660 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 CFAP45Q9UL16 551 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 PLCH1Q4KWH8 1693 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 ADAMTS7Q9UKP4 1686 aa17.84■□□□□ 0.45
CLSTN1-205ENST00000477264 BECN2A8MW95 431 aa17.83■□□□□ 0.45
CLSTN1-205ENST00000477264 CAPN2P17655 700 aa17.83■□□□□ 0.45
CLSTN1-205ENST00000477264 FERMT3Q86UX7 667 aa17.83■□□□□ 0.45
CLSTN1-205ENST00000477264 DCAF5Q96JK2 942 aa17.83■□□□□ 0.45
CLSTN1-205ENST00000477264 SRRTQ9BXP5 876 aaKnown RBP17.83■□□□□ 0.45
CLSTN1-205ENST00000477264 KDM3BQ7LBC6 1761 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 CYP27B1O15528 508 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 PNMA6AP0CW24 399 aaPredicted RBP17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 PTH1RQ03431 593 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 NECAB1Q8N987 351 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 SNRKQ9NRH2 765 aa17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 V9GYY5 206 aaPredicted RBP17.83■□□□□ 0.44
CLSTN1-205ENST00000477264 VGLL3A8MV65 326 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 CLCN6P51797 869 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 NAT10Q9H0A0 1025 aaKnown RBP17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 JCADQ9P266 1359 aa17.82■□□□□ 0.44
CLSTN1-205ENST00000477264 CEP57L1Q8IYX8 460 aa17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 GPS2Q13227 327 aa17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.81■□□□□ 0.441e-8■■■■■ 33.9
CLSTN1-205ENST00000477264 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
CLSTN1-205ENST00000477264 ZRANB2O95218 330 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 HNRNPH2P55795 449 aaKnown RBP17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 RESTQ13127 1097 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 C11orf57Q6ZUT1 292 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 ATL3Q6DD88 541 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms