RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
XRN1-211ENST00000477237 LINC01387J3KSC0 135 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 OPLAHO14841 1288 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 TM4SF5O14894 197 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 MMP20O60882 483 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 EGFRP00533 1210 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 POU5F2Q8N7G0 328 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
XRN1-211ENST00000477237 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
XRN1-211ENST00000477237 ATP9BO43861 1147 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 PSAPP07602 524 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
XRN1-211ENST00000477237 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 CLEC10AQ8IUN9 316 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 MUC3BQ9H195 1237 aa6.73□□□□□ -1.33
XRN1-211ENST00000477237 XYLBO75191 536 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 HOXD8P13378 290 aaPredicted RBP6.72□□□□□ -1.33
XRN1-211ENST00000477237 SEC13P55735 322 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 HINFPQ9BQA5 517 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 FAM83CQ9BQN1 747 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
XRN1-211ENST00000477237 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
XRN1-211ENST00000477237 WDR64B1ANS9 1081 aa6.71□□□□□ -1.34
XRN1-211ENST00000477237 CBLL1Q75N03 491 aa6.71□□□□□ -1.34
XRN1-211ENST00000477237 CACTIN-AS1Q8N1I8 211 aa6.71□□□□□ -1.34
XRN1-211ENST00000477237 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 IGFBP4P22692 258 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 SOX18P35713 384 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 BEND4Q6ZU67 534 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
XRN1-211ENST00000477237 COL26A1Q96A83 441 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
XRN1-211ENST00000477237 BMP3P12645 472 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 C11orf91Q3C1V1 193 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 ASIC4Q96FT7 647 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 POM121Q96HA1 1249 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 KCNMB2Q9Y691 235 aa6.69□□□□□ -1.34
XRN1-211ENST00000477237 DDX3YO15523 660 aaKnown RBP6.68□□□□□ -1.34
XRN1-211ENST00000477237 CDC25BP30305 580 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 DUOXA2Q1HG44 320 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 NFXL1Q6ZNB6 911 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.68□□□□□ -1.34
XRN1-211ENST00000477237 UBASH3BQ8TF42 649 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 FOXD4L4Q8WXT5 416 aaPredicted RBP6.68□□□□□ -1.34
XRN1-211ENST00000477237 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
XRN1-211ENST00000477237 ANGEL1Q9UNK9 670 aaKnown RBP6.68□□□□□ -1.34
XRN1-211ENST00000477237 ADAM11O75078 769 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 MSMPQ1L6U9 139 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 HDGFL1Q5TGJ6 251 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 WWC1Q8IX03 1113 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 CCDC39Q9UFE4 941 aa6.67□□□□□ -1.34
XRN1-211ENST00000477237 FSCN2O14926 492 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 ITGB5P18084 799 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 PREPP48147 710 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 ATP11AP98196 1134 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 COL13A1Q5TAT6 717 aaPredicted RBP6.66□□□□□ -1.34
XRN1-211ENST00000477237 MYO19Q96H55 970 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 LRFN2Q9ULH4 789 aa6.66□□□□□ -1.34
XRN1-211ENST00000477237 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
XRN1-211ENST00000477237 CDC27P30260 824 aa6.65□□□□□ -1.34
XRN1-211ENST00000477237 TREML1Q86YW5 311 aa6.65□□□□□ -1.34
XRN1-211ENST00000477237 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 KLHL23Q8NBE8 558 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 BCANQ96GW7 911 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
XRN1-211ENST00000477237 PRNPP04156 253 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 F13BP05160 661 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 JUNBP17275 347 aaPredicted RBP6.63□□□□□ -1.35
XRN1-211ENST00000477237 DPYDQ12882 1025 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 TRIP4Q15650 581 aaPredicted RBP6.63□□□□□ -1.35
XRN1-211ENST00000477237 ANKRD34AQ69YU3 496 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 ATG3Q9NT62 314 aa6.63□□□□□ -1.35
XRN1-211ENST00000477237 FOSL1P15407 271 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 EPHA1P21709 976 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
XRN1-211ENST00000477237 FBLN7Q53RD9 439 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 FBXL6Q8N531 539 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 OR13H1Q8NG92 308 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 FBXL18Q96ME1 805 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
XRN1-211ENST00000477237 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
XRN1-211ENST00000477237 SMNDC1O75940 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
XRN1-211ENST00000477237 WEE1P30291 646 aa6.61□□□□□ -1.35
XRN1-211ENST00000477237 PTK7Q13308 1070 aa6.61□□□□□ -1.35
XRN1-211ENST00000477237 ZNF648Q5T619 568 aaPredicted RBP6.61□□□□□ -1.35
XRN1-211ENST00000477237 FAM117BQ6P1L5 589 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms