RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 BCL2L13Q9BXK5 485 aa21.89■■□□□ 1.09
SMARCD3-210ENST00000477169 MKRN1Q9UHC7 482 aaKnown RBP21.89■■□□□ 1.09
SMARCD3-210ENST00000477169 RIMBP2O15034 1052 aa21.88■■□□□ 1.09
SMARCD3-210ENST00000477169 RARSP54136 660 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-210ENST00000477169 CCDC85AQ96PX6 553 aaPredicted RBP21.88■■□□□ 1.09
SMARCD3-210ENST00000477169 H7C1W4 665 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 CTSWP56202 376 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 TTLL11Q8NHH1 800 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 ZC3H12CQ9C0D7 883 aaKnown RBP21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 DBNDD1Q9H9R9 158 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 ANKIB1Q9P2G1 1089 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 CNTNAP1P78357 1384 aa21.87■■□□□ 1.09
SMARCD3-210ENST00000477169 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
SMARCD3-210ENST00000477169 SMC4Q9NTJ3 1288 aa21.86■■□□□ 1.09
SMARCD3-210ENST00000477169 GCKRQ14397 625 aa21.85■■□□□ 1.09
SMARCD3-210ENST00000477169 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
SMARCD3-210ENST00000477169 DPF2Q92785 391 aa21.85■■□□□ 1.09
SMARCD3-210ENST00000477169 CNOT7Q9UIV1 285 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-210ENST00000477169 GGA1Q9UJY5 639 aa21.85■■□□□ 1.09
SMARCD3-210ENST00000477169 H7C1D1 291 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 PSMD14O00487 310 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 ECE2O60344 883 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 DOK7Q18PE1 504 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 LINS1Q8NG48 757 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 PGAP2Q9UHJ9 254 aa21.84■■□□□ 1.09
SMARCD3-210ENST00000477169 UFL1O94874 794 aa21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 HSPA1AP0DMV8 641 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 HSPA1BP0DMV9 641 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 BRPF1P55201 1214 aaPredicted RBP21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 ZC3H15Q8WU90 426 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 GPR101Q96P66 508 aaPredicted RBP21.83■■□□□ 1.09
SMARCD3-210ENST00000477169 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
SMARCD3-210ENST00000477169 XDHP47989 1333 aa21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 MYH3P11055 1940 aa21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 RPS12P25398 132 aaKnown RBP21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 DEFB115Q30KQ5 88 aa21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 PLA2G12BQ9BX93 195 aa21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 GREM2Q9H772 168 aa21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 ZBTB12Q9Y330 459 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-210ENST00000477169 RASSF10A6NK89 507 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 G3V3G9 751 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 ATP2B4P23634 1241 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 VEGFBP49765 207 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 HIRAP54198 1017 aaPredicted RBP21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 DCAF8Q5TAQ9 597 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 KCNQ5Q9NR82 932 aa21.81■■□□□ 1.08
SMARCD3-210ENST00000477169 BCAR3O75815 825 aa21.8■■□□□ 1.08
SMARCD3-210ENST00000477169 CASP7P55210 303 aa21.8■■□□□ 1.08
SMARCD3-210ENST00000477169 ABT1Q9ULW3 272 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-210ENST00000477169 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
SMARCD3-210ENST00000477169 F6X3S4 739 aa21.79■■□□□ 1.08
SMARCD3-210ENST00000477169 VIL1P09327 827 aaKnown RBP21.79■■□□□ 1.08
SMARCD3-210ENST00000477169 FMR1Q06787 632 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMARCD3-210ENST00000477169 TRPM4Q8TD43 1214 aa21.79■■□□□ 1.08
SMARCD3-210ENST00000477169 PTPRCP08575 1304 aa21.79■■□□□ 1.08
SMARCD3-210ENST00000477169 SHTN1A0MZ66 631 aa21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 TRAF5O00463 557 aa21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 CSF1RP07333 972 aa21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 COL13A1Q5TAT6 717 aaPredicted RBP21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 CST9Q5W186 159 aa21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 NOB1Q9ULX3 412 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-210ENST00000477169 TRPM7Q96QT4 1865 aa21.77■■□□□ 1.08
SMARCD3-210ENST00000477169 IGHMBP2P38935 993 aaKnown RBP21.77■■□□□ 1.08
SMARCD3-210ENST00000477169 BEND3Q5T5X7 828 aa21.77■■□□□ 1.08
SMARCD3-210ENST00000477169 CDC37L1Q7L3B6 337 aa21.77■■□□□ 1.08
SMARCD3-210ENST00000477169 ITGA6P23229 1130 aa21.76■■□□□ 1.07
SMARCD3-210ENST00000477169 SAMD7Q7Z3H4 446 aa21.76■■□□□ 1.07
SMARCD3-210ENST00000477169 PODNQ7Z5L7 613 aa21.76■■□□□ 1.07
SMARCD3-210ENST00000477169 GLIS2Q9BZE0 524 aaPredicted RBP21.76■■□□□ 1.07
SMARCD3-210ENST00000477169 KIF16BQ96L93 1317 aa21.76■■□□□ 1.07
SMARCD3-210ENST00000477169 SCN9AQ15858 1988 aa21.75■■□□□ 1.07
SMARCD3-210ENST00000477169 WDR33Q9C0J8 1336 aaKnown RBP21.75■■□□□ 1.07
SMARCD3-210ENST00000477169 CCT4P50991 539 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 TBC1D10BQ4KMP7 808 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 AGBL3Q8NEM8 1001 aa21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 LEMD3Q9Y2U8 911 aa21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 TLL2Q9Y6L7 1015 aa21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
SMARCD3-210ENST00000477169 CELF2O95319 508 aaKnown RBP21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 RSBN1LQ6PCB5 846 aaPredicted RBP21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 ANKRD2Q9GZV1 360 aa21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 RCAN3Q9UKA8 241 aa21.73■■□□□ 1.07
SMARCD3-210ENST00000477169 WTIPA6NIX2 430 aaPredicted RBP21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 EGFRP00533 1210 aa21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 ECE1P42892 770 aa21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 RBM26Q5T8P6 1007 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 SLC4A10Q6U841 1118 aa21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 ZNF609O15014 1411 aa21.72■■□□□ 1.07
SMARCD3-210ENST00000477169 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 USP17L3A6NCW0 530 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 USP17L4A6NCW7 530 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms