RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 C3orf67Q6ZVT6 689 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
CCDC30-209ENST00000477155 RASEFQ8IZ41 740 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 PAG1Q9NWQ8 432 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 ST18O60284 1047 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 PDE8BO95263 885 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 SCARF1Q14162 830 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 CCDC129Q6ZRS4 1044 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 ZNF589Q86UQ0 364 aaPredicted RBP8.01□□□□□ -1.13
CCDC30-209ENST00000477155 FBXO3Q9UK99 471 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 HIP1O00291 1037 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 HSPA4P34932 840 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 PRPF40BQ6NWY9 871 aaKnown RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 RAD50Q92878 1312 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 RBM6P78332 1123 aaKnown RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 NFKBIBQ15653 356 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 CPA1P15085 419 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 IGHMBP2P38935 993 aaKnown RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 ZNF772Q68DY9 489 aaPredicted RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 KBTBD3Q8NAB2 608 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 LARP6Q9BRS8 491 aaKnown RBP8□□□□□ -1.13
CCDC30-209ENST00000477155 ZNF609O15014 1411 aa8□□□□□ -1.13
CCDC30-209ENST00000477155 ANKRD36CQ5JPF3 1778 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
CCDC30-209ENST00000477155 ZAP70P43403 619 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 SNX14Q9Y5W7 946 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
CCDC30-209ENST00000477155 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
CCDC30-209ENST00000477155 TPTE2Q6XPS3 522 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 VGLL2Q8N8G2 317 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 RBM8AQ9Y5S9 174 aaKnown RBP7.99□□□□□ -1.13
CCDC30-209ENST00000477155 CCDC171Q6TFL3 1326 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 PHKA1P46020 1223 aa7.99□□□□□ -1.13
CCDC30-209ENST00000477155 COL5A3P25940 1745 aaPredicted RBP7.99□□□□□ -1.13
CCDC30-209ENST00000477155 RIC1Q4ADV7 1423 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 ANAPC15P60006 121 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 PROM2Q8N271 834 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 APBA3O96018 575 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 MCAMP43121 646 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 TXNRD1Q16881 649 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 ADCK5Q3MIX3 580 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 CCDC102BQ68D86 513 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 CELF1Q92879 486 aaKnown RBP7.98□□□□□ -1.13
CCDC30-209ENST00000477155 MROH5Q6ZUA9 1318 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 RXRBP28702 533 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 CHRNDQ07001 517 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 NFIXQ14938 502 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 PUM3Q15397 648 aaKnown RBP7.98□□□□□ -1.13
CCDC30-209ENST00000477155 WASHC4Q2M389 1173 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 MCMDC2Q4G0Z9 681 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 ANKRD18AQ8IVF6 992 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 MAP4K1Q92918 833 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 CDC5LQ99459 802 aaKnown RBP7.98□□□□□ -1.13
CCDC30-209ENST00000477155 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
CCDC30-209ENST00000477155 MYH3P11055 1940 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 ABCC12Q96J65 1359 aa7.98□□□□□ -1.13
CCDC30-209ENST00000477155 SBF2Q86WG5 1849 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 CASTP20810 708 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 NECTIN1Q15223 517 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 CREB3L3Q68CJ9 461 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 LPIN2Q92539 896 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 JAKMIP1Q96N16 626 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 NYXQ9GZU5 481 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 CHMP5Q9NZZ3 219 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 TAF6LQ9Y6J9 622 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 ZKSCAN1P17029 563 aaPredicted RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 BCAMP50895 628 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 IDH1O75874 414 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 SLC5A1P13866 664 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 COL9A3Q14050 684 aaPredicted RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 SF3B3Q15393 1217 aaKnown RBP7.97□□□□□ -1.13
CCDC30-209ENST00000477155 VPS53Q5VIR6 699 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 TMX3Q96JJ7 454 aa7.97□□□□□ -1.13
CCDC30-209ENST00000477155 RREB1Q92766 1687 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 SLC27A2O14975 620 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 RNF113AO15541 343 aaKnown RBP7.96□□□□□ -1.13
CCDC30-209ENST00000477155 DTNBO60941 627 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 FGFR2P21802 821 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 BRWD3Q6RI45 1802 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 TCEANC2Q96MN5 208 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 TFCP2L1Q9NZI6 479 aa7.96□□□□□ -1.13
CCDC30-209ENST00000477155 EPB41L2O43491 1005 aaKnown RBP7.96□□□□□ -1.14
CCDC30-209ENST00000477155 CYP2E1P05181 493 aaPredicted RBP7.96□□□□□ -1.14
CCDC30-209ENST00000477155 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
CCDC30-209ENST00000477155 SLC10A5Q5PT55 438 aa7.96□□□□□ -1.14
CCDC30-209ENST00000477155 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
CCDC30-209ENST00000477155 TAF1P21675 1872 aa7.96□□□□□ -1.14
CCDC30-209ENST00000477155 RPS8P62241 208 aaKnown RBP7.96□□□□□ -1.14
CCDC30-209ENST00000477155 MED23Q9ULK4 1368 aa7.95□□□□□ -1.14
CCDC30-209ENST00000477155 GYS1P13807 737 aa7.95□□□□□ -1.14
CCDC30-209ENST00000477155 ZMYM1Q5SVZ6 1142 aa7.95□□□□□ -1.14
CCDC30-209ENST00000477155 CNBD1Q8NA66 436 aa7.95□□□□□ -1.14
CCDC30-209ENST00000477155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC30-209ENST00000477155 MINPP1Q9UNW1 487 aa7.95□□□□□ -1.14
CCDC30-209ENST00000477155 M0R2C6 588 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms