RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
BRCA1-214ENST00000477152 CNGB1Q14028 1251 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-214ENST00000477152 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
BRCA1-214ENST00000477152 CNBD1Q8NA66 436 aa9.63□□□□□ -0.87
BRCA1-214ENST00000477152 ZNF496Q96IT1 587 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-214ENST00000477152 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
BRCA1-214ENST00000477152 SNRKQ9NRH2 765 aa9.63□□□□□ -0.87
BRCA1-214ENST00000477152 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-214ENST00000477152 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
BRCA1-214ENST00000477152 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
BRCA1-214ENST00000477152 IL17REQ8NFR9 667 aa9.62□□□□□ -0.87
BRCA1-214ENST00000477152 SCN7AQ01118 1682 aa9.62□□□□□ -0.87
BRCA1-214ENST00000477152 UTRNP46939 3433 aa9.62□□□□□ -0.87
BRCA1-214ENST00000477152 SPTLC1O15269 473 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 KDM4AO75164 1064 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 PRKAR2BP31323 418 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 GCGRP47871 477 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 STYK1Q6J9G0 422 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 PNISRQ8TF01 805 aaKnown RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 DICER1Q9UPY3 1922 aaKnown RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
BRCA1-214ENST00000477152 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 TIAM2Q8IVF5 1701 aa9.61□□□□□ -0.87
BRCA1-214ENST00000477152 CEMIPQ8WUJ3 1361 aa9.6□□□□□ -0.87
BRCA1-214ENST00000477152 RNF40O75150 1001 aa9.6□□□□□ -0.87
BRCA1-214ENST00000477152 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-214ENST00000477152 MASTLQ96GX5 879 aa9.6□□□□□ -0.87
BRCA1-214ENST00000477152 RASSF7Q02833 373 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-214ENST00000477152 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 TAOK3Q9H2K8 898 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 LTBP3Q9NS15 1303 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-214ENST00000477152 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 DNAJC5GQ8N7S2 189 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
BRCA1-214ENST00000477152 BCORQ6W2J9 1755 aa9.59□□□□□ -0.88
BRCA1-214ENST00000477152 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 IQCA1LA6NCM1 817 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 C21orf2O43822 256 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 A1BGP04217 495 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 ALDH1B1P30837 517 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 ARID3AQ99856 593 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 FER1L6Q2WGJ9 1857 aa9.58□□□□□ -0.88
BRCA1-214ENST00000477152 ANKRD31Q8N7Z5 1873 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 BHMG1C9JSJ3 638 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-214ENST00000477152 HOXA2O43364 376 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 CAMTA2O94983 1202 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 NPR1P16066 1061 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 TAF7Q15545 349 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-214ENST00000477152 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 CACNA1SQ13698 1873 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 PPP2R1AP30153 589 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 PBX2P40425 430 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 RTKN2Q8IZC4 609 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
BRCA1-214ENST00000477152 TMX4Q9H1E5 349 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-214ENST00000477152 LILRB3O75022 631 aa9.56□□□□□ -0.88
BRCA1-214ENST00000477152 SRGNP10124 158 aa9.56□□□□□ -0.88
BRCA1-214ENST00000477152 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
BRCA1-214ENST00000477152 APBB1O00213 710 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 NFKBIEO00221 500 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 FUT2Q10981 343 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 PRPF40BQ6NWY9 871 aaKnown RBP9.55□□□□□ -0.88
BRCA1-214ENST00000477152 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 ZFRQ96KR1 1074 aaKnown RBP9.55□□□□□ -0.88
BRCA1-214ENST00000477152 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCA1-214ENST00000477152 USP16Q9Y5T5 823 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 GOLGB1Q14789 3259 aaKnown RBP9.55□□□□□ -0.88
BRCA1-214ENST00000477152 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 SCN4AP35499 1836 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 MCM10Q7L590 875 aa9.55□□□□□ -0.88
BRCA1-214ENST00000477152 FDX1P10109 184 aa9.54□□□□□ -0.88
BRCA1-214ENST00000477152 COL11A2P13942 1736 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-214ENST00000477152 ERVV-1B6SEH8 477 aa9.54□□□□□ -0.88
BRCA1-214ENST00000477152 AP1G2O75843 785 aa9.54□□□□□ -0.88
BRCA1-214ENST00000477152 CFHP08603 1231 aa9.54□□□□□ -0.88
BRCA1-214ENST00000477152 FKBP4Q02790 459 aaKnown RBP eCLIP9.54□□□□□ -0.88
BRCA1-214ENST00000477152 MTMR14Q8NCE2 650 aa9.54□□□□□ -0.88
BRCA1-214ENST00000477152 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
BRCA1-214ENST00000477152 KCNQ3O43525 872 aa9.53□□□□□ -0.88
BRCA1-214ENST00000477152 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCA1-214ENST00000477152 ADGRD1Q6QNK2 874 aa9.53□□□□□ -0.88
BRCA1-214ENST00000477152 JDP2Q8WYK2 163 aa9.53□□□□□ -0.88
BRCA1-214ENST00000477152 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
BRCA1-214ENST00000477152 ERBB4Q15303 1308 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms