RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 PNPLA7Q6ZV29 1317 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 SNAP23O00161 211 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
COL4A6-206ENST00000477085 ESYT1Q9BSJ8 1104 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
COL4A6-206ENST00000477085 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
COL4A6-206ENST00000477085 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
COL4A6-206ENST00000477085 SERPINB2P05120 415 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
COL4A6-206ENST00000477085 EVI5LQ96CN4 794 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 HAUS7Q99871 368 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
COL4A6-206ENST00000477085 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 TAF5LO75529 589 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 FGFR2P21802 821 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
COL4A6-206ENST00000477085 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
COL4A6-206ENST00000477085 TAF1P21675 1872 aa17.59■□□□□ 0.41
COL4A6-206ENST00000477085 MSH5O43196 834 aa17.59■□□□□ 0.41
COL4A6-206ENST00000477085 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
COL4A6-206ENST00000477085 WTIPA6NIX2 430 aaPredicted RBP17.58■□□□□ 0.41
COL4A6-206ENST00000477085 DEFB132Q7Z7B7 95 aa17.58■□□□□ 0.41
COL4A6-206ENST00000477085 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.41
COL4A6-206ENST00000477085 KIF2CQ99661 725 aa17.58■□□□□ 0.41
COL4A6-206ENST00000477085 CHRNDQ07001 517 aa17.58■□□□□ 0.4
COL4A6-206ENST00000477085 SCARF1Q14162 830 aa17.58■□□□□ 0.4
COL4A6-206ENST00000477085 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
COL4A6-206ENST00000477085 CHGBP05060 677 aa17.57■□□□□ 0.4
COL4A6-206ENST00000477085 BSDC1Q9NW68 430 aaPredicted RBP17.57■□□□□ 0.4
COL4A6-206ENST00000477085 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 NPHP1O15259 732 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 PUM3Q15397 648 aaKnown RBP17.56■□□□□ 0.4
COL4A6-206ENST00000477085 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
COL4A6-206ENST00000477085 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
COL4A6-206ENST00000477085 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
COL4A6-206ENST00000477085 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 SGSM2O43147 1006 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 RPS8P62241 208 aaKnown RBP17.56■□□□□ 0.4
COL4A6-206ENST00000477085 NLGN1Q8N2Q7 840 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 LPIN2Q92539 896 aa17.56■□□□□ 0.4
COL4A6-206ENST00000477085 IFIT1P09914 478 aaKnown RBP17.55■□□□□ 0.4
COL4A6-206ENST00000477085 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
COL4A6-206ENST00000477085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL4A6-206ENST00000477085 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
COL4A6-206ENST00000477085 ANTXR1Q9H6X2 564 aa17.55■□□□□ 0.4
COL4A6-206ENST00000477085 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
COL4A6-206ENST00000477085 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
COL4A6-206ENST00000477085 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
COL4A6-206ENST00000477085 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
COL4A6-206ENST00000477085 FSD1Q9BTV5 496 aa17.54■□□□□ 0.4
COL4A6-206ENST00000477085 GOLIM4O00461 696 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 REC8O95072 547 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 PHKA1P46020 1223 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 TTC39AQ5SRH9 613 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 PI16Q6UXB8 463 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 PAG1Q9NWQ8 432 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 MCAMP43121 646 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 NMIQ13287 307 aaPredicted RBP17.53■□□□□ 0.4
COL4A6-206ENST00000477085 DIAPH3Q9NSV4 1193 aa17.53■□□□□ 0.4
COL4A6-206ENST00000477085 A0A0D9SFI3 127 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
COL4A6-206ENST00000477085 MMP10P09238 476 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 ST5P78524 1137 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 KBTBD3Q8NAB2 608 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 ZNF512BQ96KM6 892 aaPredicted RBP17.52■□□□□ 0.4
COL4A6-206ENST00000477085 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
COL4A6-206ENST00000477085 ANO2Q9NQ90 1003 aa17.52■□□□□ 0.4
COL4A6-206ENST00000477085 EIF5BO60841 1220 aaKnown RBP17.51■□□□□ 0.39
COL4A6-206ENST00000477085 SLC5A1P13866 664 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 ZAP70P43403 619 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 BAG6P46379 1132 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL4A6-206ENST00000477085 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
COL4A6-206ENST00000477085 STK32BQ9NY57 414 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
COL4A6-206ENST00000477085 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
COL4A6-206ENST00000477085 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
COL4A6-206ENST00000477085 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
COL4A6-206ENST00000477085 ARID4AP29374 1257 aaPredicted RBP17.5■□□□□ 0.39
COL4A6-206ENST00000477085 BCAMP50895 628 aa17.5■□□□□ 0.39
COL4A6-206ENST00000477085 GRAPQ13588 217 aa17.5■□□□□ 0.39
COL4A6-206ENST00000477085 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
COL4A6-206ENST00000477085 A0A1B0GUL6 1792 aa17.5■□□□□ 0.39
COL4A6-206ENST00000477085 PTH1RQ03431 593 aa17.49■□□□□ 0.39
COL4A6-206ENST00000477085 HIP1O00291 1037 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms