RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 MAGEC2Q9UBF1 373 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 PCDH11XQ9BZA7 1347 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 PCDH11YQ9BZA8 1340 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 KLF18A0A0U1RQI7 1052 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 SLC27A2O14975 620 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 IL2RBP14784 551 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 TNNI3KQ59H18 835 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 FPGT-TNNI3KV9GXZ4 949 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 KDRP35968 1356 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 RPS6KB1P23443 525 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 METAP2P50579 478 aaKnown RBP eCLIP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 MINDY4BA8MYZ0 360 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 DHX32Q7L7V1 743 aaKnown RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-208ENST00000477054 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
GSDMB-208ENST00000477054 NEXMIFQ5QGS0 1516 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 TMEM67Q5HYA8 995 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 GSDMDP57764 484 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 GABPB1Q06547 395 aaPredicted RBP11.29□□□□□ -0.6
GSDMB-208ENST00000477054 STIM1Q13586 685 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 GCKRQ14397 625 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 TSPOAP1O95153 1857 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
GSDMB-208ENST00000477054 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
GSDMB-208ENST00000477054 KCNG4Q8TDN1 519 aa11.29□□□□□ -0.6
GSDMB-208ENST00000477054 FAM227BQ96M60 508 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 PTPRMP28827 1452 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 KCNQ3O43525 872 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 CDK5RAP3Q96JB5 506 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 TYRO3Q06418 890 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
GSDMB-208ENST00000477054 IGSF3O75054 1194 aa11.27□□□□□ -0.6
GSDMB-208ENST00000477054 HSP90B2PQ58FF3 399 aa11.27□□□□□ -0.6
GSDMB-208ENST00000477054 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.6
GSDMB-208ENST00000477054 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.6
GSDMB-208ENST00000477054 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.6
GSDMB-208ENST00000477054 PALD1Q9ULE6 856 aa11.27□□□□□ -0.6
GSDMB-208ENST00000477054 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
GSDMB-208ENST00000477054 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
GSDMB-208ENST00000477054 EYA2O00167 538 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 RGS12O14924 1447 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 PRC1O43663 620 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 TNNT1P13805 278 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 CTCFLQ8NI51 663 aaPredicted RBP11.27□□□□□ -0.61
GSDMB-208ENST00000477054 KIF18AQ8NI77 898 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
GSDMB-208ENST00000477054 PTPDC1A2A3K4 754 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 TTLL5Q6EMB2 1281 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
GSDMB-208ENST00000477054 KRT23Q9C075 422 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ZNHIT6Q9NWK9 470 aaKnown RBP11.26□□□□□ -0.61
GSDMB-208ENST00000477054 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ZBTB43O43298 467 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 RANBP6O60518 1105 aaKnown RBP11.26□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 ZNF830Q96NB3 372 aaPredicted RBP11.26□□□□□ -0.61
GSDMB-208ENST00000477054 CNNM2Q9H8M5 875 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
GSDMB-208ENST00000477054 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 GTF2A1P52655 376 aaPredicted RBP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 C16orf45Q96MC5 204 aaPredicted RBP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 BIN1O00499 593 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 ALG1Q9BT22 464 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 DNAJC25Q9H1X3 360 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms