RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 CHMLP26374 656 aa9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 NAA30Q147X3 362 aaPredicted RBP9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 SLFNL1Q499Z3 407 aa9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 ARMC3Q5W041 872 aa9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 EIF3CQ99613 913 aaKnown RBP9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
CNTNAP3B-205ENST00000476961 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 SMTNL1A8MU46 457 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 SMAPO00193 183 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 SGSM2O43147 1006 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 CAPN15O75808 1086 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 CCDC15Q0P6D6 951 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 GPS2Q13227 327 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 LEKR1Q6ZMV7 388 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 KDRP35968 1356 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
CNTNAP3B-205ENST00000476961 ZC3H6P61129 1189 aaKnown RBP9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 NFE2L2Q16236 605 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CCDC181Q5TID7 509 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 WDR63Q8IWG1 891 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SMC5Q8IY18 1101 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CXorf38Q8TB03 319 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 KIAA1524Q8TCG1 905 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 DNAAF4Q8WXU2 420 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SMARCE1Q969G3 411 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TRIM6Q9C030 488 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SPATS2LQ9NUQ6 558 aaKnown RBP9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 BIN2Q9UBW5 565 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SYNPO2Q9UMS6 1093 aa9.71□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CDKL5O76039 1030 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ELF1P32519 619 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CCNHP51946 323 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ZKSCAN2Q63HK3 967 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CAVIN1Q6NZI2 390 aaKnown RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 KCTD17Q8N5Z5 321 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GIMAP7Q8NHV1 300 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SNX21Q969T3 373 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CRYBG1Q9Y4K1 1723 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CORO7P57737 925 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 RBBP5Q15291 538 aaKnown RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 LRSAM1Q6UWE0 723 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GAS2L2Q8NHY3 880 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 EVI5LQ96CN4 794 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 YIPF2Q9BWQ6 316 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 C22orf23Q9BZE7 217 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TMX4Q9H1E5 349 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 FRMD4BQ9Y2L6 1034 aa9.7□□□□□ -0.86
CNTNAP3B-205ENST00000476961 EPB41L2O43491 1005 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SNUPNO95149 360 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TPM4P67936 248 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ST5P78524 1137 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PDIA5Q14554 519 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 FBXO38Q6PIJ6 1188 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 RBM12BQ8IXT5 1001 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CRACR2AQ9BSW2 395 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 EME2A4GXA9 379 aaPredicted RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 RNF214Q8ND24 703 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 AGAP3Q96P47 875 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SRRTQ9BXP5 876 aaKnown RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CWC25Q9NXE8 425 aaPredicted RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 MNAT1P51948 309 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 KCNV1Q6PIU1 500 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PHC3Q8NDX5 983 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GTF3C6Q969F1 213 aa9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 BAG1Q99933 345 aaPredicted RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 V9GYY5 206 aaPredicted RBP9.69□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TTLL5Q6EMB2 1281 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PLEKHG4BQ96PX9 1271 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 FHOD1Q9Y613 1164 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SYNRGQ9UMZ2 1314 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ANKRD24Q8TF21 1146 aa9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3B-205ENST00000476961 RTN2O75298 545 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 IVLP07476 585 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms