RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 A0A1B0GUL6 1792 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 SHTN1A0MZ66 631 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 CASP7P55210 303 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 PODXL2Q9NZ53 605 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 ANKIB1Q9P2G1 1089 aa14.25□□□□□ -0.13
PTPRN-213ENST00000476930 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
PTPRN-213ENST00000476930 UFL1O94874 794 aa14.24□□□□□ -0.13
PTPRN-213ENST00000476930 FMR1Q06787 632 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRN-213ENST00000476930 TNIP1Q15025 636 aa14.24□□□□□ -0.13
PTPRN-213ENST00000476930 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
PTPRN-213ENST00000476930 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
PTPRN-213ENST00000476930 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
PTPRN-213ENST00000476930 ZNF646O15015 1829 aaPredicted RBP14.23□□□□□ -0.13
PTPRN-213ENST00000476930 PSMD14O00487 310 aa14.23□□□□□ -0.13
PTPRN-213ENST00000476930 ECE2O60344 883 aa14.23□□□□□ -0.13
PTPRN-213ENST00000476930 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
PTPRN-213ENST00000476930 EYA3Q99504 573 aa14.23□□□□□ -0.13
PTPRN-213ENST00000476930 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
PTPRN-213ENST00000476930 ADARB2Q9NS39 739 aaKnown RBP14.23□□□□□ -0.13
PTPRN-213ENST00000476930 MKRN1Q9UHC7 482 aaKnown RBP14.23□□□□□ -0.13
PTPRN-213ENST00000476930 GGA1Q9UJY5 639 aa14.23□□□□□ -0.13
PTPRN-213ENST00000476930 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
PTPRN-213ENST00000476930 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
PTPRN-213ENST00000476930 ZC3H12CQ9C0D7 883 aaKnown RBP14.22□□□□□ -0.13
PTPRN-213ENST00000476930 CNOT7Q9UIV1 285 aaKnown RBP14.22□□□□□ -0.13
PTPRN-213ENST00000476930 MINPP1Q9UNW1 487 aa14.22□□□□□ -0.13
PTPRN-213ENST00000476930 XDHP47989 1333 aa14.21□□□□□ -0.13
PTPRN-213ENST00000476930 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
PTPRN-213ENST00000476930 CSF1RP07333 972 aa14.21□□□□□ -0.13
PTPRN-213ENST00000476930 HIRAP54198 1017 aaPredicted RBP14.21□□□□□ -0.13
PTPRN-213ENST00000476930 FAM161AQ3B820 660 aa14.21□□□□□ -0.13
PTPRN-213ENST00000476930 TRPM4Q8TD43 1214 aa14.21□□□□□ -0.13
PTPRN-213ENST00000476930 BSDC1Q9NW68 430 aaPredicted RBP14.21□□□□□ -0.13
PTPRN-213ENST00000476930 TRAF5O00463 557 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 ITGA6P23229 1130 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 ATP2B4P23634 1241 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 FOXO4P98177 505 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 SLFN5Q08AF3 891 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
PTPRN-213ENST00000476930 E9PSI1 815 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 G3V3G9 751 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 H7C1D1 291 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 SAMD7Q7Z3H4 446 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
PTPRN-213ENST00000476930 DPF2Q92785 391 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 CNTNAP1P78357 1384 aa14.19□□□□□ -0.14
PTPRN-213ENST00000476930 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
PTPRN-213ENST00000476930 EGFRP00533 1210 aa14.18□□□□□ -0.14
PTPRN-213ENST00000476930 IGHMBP2P38935 993 aaKnown RBP14.18□□□□□ -0.14
PTPRN-213ENST00000476930 CCT4P50991 539 aaKnown RBP14.18□□□□□ -0.14
PTPRN-213ENST00000476930 EPHA10Q5JZY3 1008 aa14.18□□□□□ -0.14
PTPRN-213ENST00000476930 GLIS2Q9BZE0 524 aaPredicted RBP14.18□□□□□ -0.14
PTPRN-213ENST00000476930 PGAP2Q9UHJ9 254 aa14.18□□□□□ -0.14
PTPRN-213ENST00000476930 GRM8O00222 908 aa14.17□□□□□ -0.14
PTPRN-213ENST00000476930 VIL1P09327 827 aaKnown RBP14.17□□□□□ -0.14
PTPRN-213ENST00000476930 VEGFBP49765 207 aa14.17□□□□□ -0.14
PTPRN-213ENST00000476930 TBC1D10BQ4KMP7 808 aaPredicted RBP14.17□□□□□ -0.14
PTPRN-213ENST00000476930 CST9Q5W186 159 aa14.17□□□□□ -0.14
PTPRN-213ENST00000476930 TXNRD3Q86VQ6 643 aa14.17□□□□□ -0.14
PTPRN-213ENST00000476930 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 RBM26Q5T8P6 1007 aaKnown RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 LMBR1LQ6UX01 489 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 ZC3H15Q8WU90 426 aaKnown RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 SSH1Q8WYL5 1049 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 SRCIN1Q9C0H9 1055 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
PTPRN-213ENST00000476930 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 MED23Q9ULK4 1368 aa14.16□□□□□ -0.14
PTPRN-213ENST00000476930 RASSF10A6NK89 507 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 ALDH1L1O75891 902 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 KLRK1P26718 216 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 CHRNDQ07001 517 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 DEFB115Q30KQ5 88 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 RSBN1LQ6PCB5 846 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-213ENST00000476930 DLK2Q6UY11 383 aa14.15□□□□□ -0.14
PTPRN-213ENST00000476930 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
PTPRN-213ENST00000476930 ZNF594Q96JF6 807 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-213ENST00000476930 ABT1Q9ULW3 272 aaKnown RBP14.15□□□□□ -0.14
PTPRN-213ENST00000476930 SNAP23O00161 211 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
PTPRN-213ENST00000476930 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
PTPRN-213ENST00000476930 PODNQ7Z5L7 613 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
PTPRN-213ENST00000476930 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 MXD3Q9BW11 206 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 ANKRD2Q9GZV1 360 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 LEMD3Q9Y2U8 911 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
PTPRN-213ENST00000476930 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms